RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 IFIT3O14879 490 aaKnown RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 KIF5CO60282 957 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 ERLIN1O75477 346 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 EIF3JO75822 258 aaKnown RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 CLPTM1O96005 669 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 GYPCP04921 128 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 TFAP2AP05549 437 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 HNRNPA1P09651 372 aaKnown RBP eCLIP4.3□□□□□ -1.72
SGCE-211ENST00000522045 PCP11498 1178 aaKnown RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 CAPN2P17655 700 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 NT5C2P49902 561 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 RHBDL3P58872 404 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 KCNJ10P78508 379 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 GALNT2Q10471 571 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 SLC9C2Q5TAH2 1124 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 Q75L30 129 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 GSTA5Q7RTV2 222 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 TMTC2Q8N394 836 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 NEK11Q8NG66 645 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 CCDC12Q8WUD4 166 aaPredicted RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 PRMT6Q96LA8 375 aaPredicted RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 TMEM68Q96MH6 324 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 GSDMAQ96QA5 445 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 CABLES2Q9BTV7 478 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 PARD6BQ9BYG5 372 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 NAPBQ9H115 298 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 RNF41Q9H4P4 317 aaPredicted RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 VIPAS39Q9H9C1 493 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 SIX2Q9NPC8 291 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 SAMSN1Q9NSI8 373 aaKnown RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 CWC15Q9P013 229 aaKnown RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 LIMA1Q9UHB6 759 aaKnown RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 GPR52Q9Y2T5 361 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 WNK3Q9BYP7 1800 aa4.3□□□□□ -1.72
SGCE-211ENST00000522045 COL1A1P02452 1464 aaPredicted RBP4.3□□□□□ -1.72
SGCE-211ENST00000522045 BCL9O00512 1426 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 CHD4Q14839 1912 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 ERICH4A6NGS2 130 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 ERVV-1B6SEH8 477 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 POLR2DO15514 142 aaKnown RBP4.29□□□□□ -1.72
SGCE-211ENST00000522045 SYNCRIPO60506 623 aaKnown RBP4.29□□□□□ -1.72
SGCE-211ENST00000522045 IDH1O75874 414 aaKnown RBP4.29□□□□□ -1.72
SGCE-211ENST00000522045 MBD4O95243 580 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 IVLP07476 585 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 TYMPP19971 482 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 ITGA3P26006 1051 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 KRT9P35527 623 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 ACTN2P35609 894 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 CTCFP49711 727 aaPredicted RBP4.29□□□□□ -1.72
SGCE-211ENST00000522045 BMXP51813 675 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 TLE2Q04725 743 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 PDE1CQ14123 709 aaPredicted RBP4.29□□□□□ -1.72
SGCE-211ENST00000522045 MTF1Q14872 753 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 WTAPQ15007 396 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 KARSQ15046 597 aaKnown RBP4.29□□□□□ -1.72
SGCE-211ENST00000522045 TAF12Q16514 161 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 MEA1Q16626 185 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 DUOXA1Q1HG43 343 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 FILIP1LQ4L180 1135 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 SLC35F6Q8N357 371 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 GBGT1Q8N5D6 347 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 OR1J2Q8NGS2 313 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 OR14L1PQ8NHC6 308 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 NAPGQ99747 312 aaPredicted RBP4.29□□□□□ -1.72
SGCE-211ENST00000522045 DESI2Q9BSY9 194 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 MED4Q9NPJ6 270 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 RPS10P5Q9NQ39 176 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 RBM28Q9NW13 759 aaKnown RBP4.29□□□□□ -1.72
SGCE-211ENST00000522045 RWDD2AQ9UIY3 292 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 PYGO1Q9Y3Y4 419 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 A0A1B0GUL6 1792 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 LAMB1P07942 1786 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 PHLPP1O60346 1717 aa4.29□□□□□ -1.72
SGCE-211ENST00000522045 CACNA1SQ13698 1873 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 XIRP1Q702N8 1843 aaKnown RBP4.28□□□□□ -1.72
SGCE-211ENST00000522045 FLT1P17948 1338 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 CTAGE15A4D2H0 777 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 NPHP1O15259 732 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 STARD3NLO95772 234 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 KRT19P08727 400 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 IL7RP16871 459 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 XBP1P17861 261 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 VAMP2P63027 116 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 OLIG2Q13516 323 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 KRT31Q15323 416 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 ZSCAN26Q16670 478 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 CXorf66Q5JRM2 361 aaPredicted RBP4.28□□□□□ -1.72
SGCE-211ENST00000522045 ADAMTSL4-AS1Q5T5F5 129 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 LCN10Q6JVE6 187 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 CYP26C1Q6V0L0 522 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 TMTC3Q6ZXV5 915 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 CTAGE6Q86UF2 777 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 OR2T6Q8NHC8 308 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 SAAL1Q96ER3 474 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 PAGE5Q96GU1 130 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 GMPPAQ96IJ6 420 aaPredicted RBP4.28□□□□□ -1.72
SGCE-211ENST00000522045 RPGRIP1Q96KN7 1286 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 NACAP1Q9BZK3 213 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms