RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 FAM131BQ86XD5 332 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 CDKL3Q8IVW4 592 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 PALM2Q8IXS6 379 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 C10orf67Q8IYJ2 551 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 SIX6OS1Q8N1H7 587 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 DNAAF3Q8N9W5 541 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 NETO2Q8NC67 525 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 GDAP1Q8TB36 358 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 CCDC110Q8TBZ0 833 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 DENND1AQ8TEH3 1009 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 KLHL6Q8WZ60 621 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 IRGQQ8WZA9 623 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 NT5C3BQ969T7 300 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 FAM149B1Q96BN6 582 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 RPRD1AQ96P16 312 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 ELAC2Q9BQ52 826 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 DHRS4Q9BTZ2 278 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 NLNQ9BYT8 704 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 TRABDQ9H4I3 376 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 RAB6BQ9NRW1 208 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 KCNN3Q9UGI6 736 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 SLC24A2Q9UI40 661 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 VANGL2Q9ULK5 521 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 SUFUQ9UMX1 484 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 CHMP2BQ9UQN3 213 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 ZNF281Q9Y2X9 895 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 TEX264Q9Y6I9 313 aa7.09□□□□□ -1.27
CTNNA1-227ENST00000521387 SYNJ2BP-COX16A0A087WUM0 186 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 H3BRJ5 948 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 MFSD11O43934 449 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC19A2O60779 497 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 AVILO75366 819 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 CLDN11O75508 207 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 PIAS1O75925 651 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 FBXO21O94952 628 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ATE1O95260 518 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 IGHA1P01876 353 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 APOEP02649 317 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 RHOCP08134 193 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 VIMP08670 466 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ESRRAP11474 423 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 KELP23276 732 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 PHBP35232 272 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ARL4AP40617 200 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ACTR1BP42025 376 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 LIG3P49916 1009 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC8A3P57103 927 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 GEMIN4P57678 1058 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ACTR1AP61163 376 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 HHEXQ03014 270 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 DEUP1Q05D60 604 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 PRKD1Q15139 912 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC1A5Q15758 541 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.08□□□□□ -1.282e-6■■□□□ 14.4
CTNNA1-227ENST00000521387 MYLK3Q32MK0 819 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 RNF187Q5TA31 235 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 PRAMEF17Q5VTA0 474 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 FAM198BQ6UWH4 519 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 C4orf22Q6V702 233 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 CERS6Q6ZMG9 384 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 CAMKMTQ7Z624 323 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 PLXDC1Q8IUK5 500 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 PSTKQ8IV42 348 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ZNF683Q8IZ20 524 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 PDIK1LQ8N165 341 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 OTUD6BQ8N6M0 293 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 MZB1Q8WU39 189 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 DCAKDQ8WVC6 231 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 DYDC1Q8WWB3 177 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 CNDP1Q96KN2 507 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 FCRL4Q96PJ5 515 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 QKIQ96PU8 341 aaKnown RBP eCLIP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 FRMD8Q9BZ67 464 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 TKTL2Q9H0I9 626 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ACSS3Q9H6R3 686 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 SARS2Q9NP81 518 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ANLNQ9NQW6 1124 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 DTLQ9NZJ0 730 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 COX16Q9P0S2 106 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 LRFN1Q9P244 771 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 ZNF835Q9Y2P0 537 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 TTLL3Q9Y4R7 772 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 SNX10Q9Y5X0 201 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC30A1Q9Y6M5 507 aa7.08□□□□□ -1.28
CTNNA1-227ENST00000521387 HACD1B0YJ81 288 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 FAM72CH0Y354 149 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 I6L893 689 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 EEF2KO00418 725 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 ADAM10O14672 748 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 TOX3O15405 576 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PRPF4O43172 522 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PHF1O43189 567 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 RECQL5O94762 991 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 ZWINTO95229 277 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 C1QAP02745 245 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 HOXD4P09016 255 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 NELFEP18615 380 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 KRT15P19012 456 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 TPSB2P20231 275 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 TAC1P20366 129 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms