RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TGFB1P01137 390 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 ENO2P09104 434 aaPredicted RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 ZNF30P17039 623 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 EPORP19235 508 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 AP1S2P56377 157 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 CDKL1Q00532 357 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 FOXM1Q08050 763 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 MERTKQ12866 999 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 GPM6BQ13491 265 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 DHCR24Q15392 516 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 CYP2A13Q16696 494 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 GTDC1Q4AE62 458 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 MPP7Q5T2T1 576 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 SUSD1Q6UWL2 747 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 SBSNQ6UWP8 590 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 B3GNT6Q6ZMB0 384 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 HSD11B1LQ7Z5J1 315 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 MUC13Q9H3R2 512 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 ZNF556Q9HAH1 456 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 ELOVL2Q9NXB9 296 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 VPS29Q9UBQ0 182 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 TMEM98Q9Y2Y6 226 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 TDRD15B5MCY1 1934 aaKnown RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 A6NHS1 94 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 hCG_2039718K7EN88 272 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 H6PDO95479 791 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 OXTRP30559 389 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 HNMTP50135 292 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 SUOXP51687 545 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 ELP6Q0PNE2 266 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 SIM2Q14190 667 aaPredicted RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 HKDC1Q2TB90 917 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 UGT3A2Q3SY77 523 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 PSRC1Q6PGN9 363 aaPredicted RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 HACD2Q6Y1H2 254 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 MACC1Q6ZN28 852 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 Q6ZSR9 355 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 LRRC70Q7Z2Q7 622 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 ZFAND4Q86XD8 727 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 CPXM2Q8N436 756 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 C1orf52Q8N6N3 182 aaKnown RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 CELF5Q8N6W0 485 aaKnown RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 MRPL43Q8N983 215 aaKnown RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 PROKR1Q8TCW9 393 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 CSGALNACT1Q8TDX6 532 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 ZUFSPQ96AP4 578 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 PAK6Q9NQU5 681 aaPredicted RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 SCN3BQ9NY72 215 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 TRPC4Q9UBN4 977 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 RAPGEFL1Q9UHV5 662 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 H0Y858 1186 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 ACOT8O14734 319 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 EEDO75530 441 aaKnown RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 MEF2AQ02078 507 aaPredicted RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 DMC1Q14565 340 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 GRIN2CQ14957 1233 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 ZNF805Q5CZA5 627 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 GPR107Q5VW38 600 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 TTC23Q5W5X9 447 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 OGFOD2Q6N063 350 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 FAM124AQ86V42 546 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 RNF175Q8N4F7 328 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 FBXL20Q96IG2 436 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 REEP1Q9H902 201 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 IMP3Q9NV31 184 aaKnown RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 ADPRHL2Q9NX46 363 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 DNMT3BQ9UBC3 853 aaKnown RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 RIMS3Q9UJD0 308 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 SAMHD1Q9Y3Z3 626 aaKnown RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 PCDHGA11Q9Y5H2 935 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 SOCS2O14508 198 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 AHCYL1O43865 530 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 POP7O75817 140 aaKnown RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 RAP2AP10114 183 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 DDX6P26196 483 aaKnown RBP eCLIP9.89□□□□□ -0.83
MCF2-209ENST00000520602 NRIP1P48552 1158 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 C2orf80Q0P641 193 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 RCAN2Q14206 197 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 MED27Q6P2C8 311 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 BPIFB1Q8TDL5 484 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 UTP15Q8TED0 518 aaKnown RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 TSPEARQ8WU66 669 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 GLYATL1Q969I3 302 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 TMBIM1Q969X1 311 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 TMEM125Q96AQ2 219 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 CCM2Q9BSQ5 444 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 MCMBPQ9BTE3 642 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 AHSPQ9NZD4 102 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 CXXC1Q9P0U4 656 aaPredicted RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 AP3M1Q9Y2T2 418 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 SGTAO43765 313 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 TULP3O75386 442 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 DIRAS1O95057 198 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 PRKACGP22612 351 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 RPS3P23396 243 aaKnown RBP eCLIP9.89□□□□□ -0.83
MCF2-209ENST00000520602 RPL10P27635 214 aaKnown RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 PTSQ03393 145 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 SF1Q15637 639 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms