RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 ALG3Q92685 438 aa19.25■□□□□ 0.67
HDAC2-207ENST00000520170 BARD1Q99728 777 aaKnown RBP19.25■□□□□ 0.67
HDAC2-207ENST00000520170 TSPY26PQ9H489 355 aa19.25■□□□□ 0.67
HDAC2-207ENST00000520170 SLC6A20Q9NP91 592 aa19.25■□□□□ 0.67
HDAC2-207ENST00000520170 AGPAT4Q9NRZ5 378 aa19.25■□□□□ 0.67
HDAC2-207ENST00000520170 DUSP10Q9Y6W6 482 aa19.25■□□□□ 0.67
HDAC2-207ENST00000520170 CROCCQ5TZA2 2017 aa19.24■□□□□ 0.67
HDAC2-207ENST00000520170 CCDC162PA2VCL2 907 aa19.24■□□□□ 0.67
HDAC2-207ENST00000520170 MROH6A6NGR9 719 aa19.24■□□□□ 0.67
HDAC2-207ENST00000520170 ZNF189O75820 626 aaPredicted RBP19.24■□□□□ 0.67
HDAC2-207ENST00000520170 MAGP20916 626 aa19.24■□□□□ 0.67
HDAC2-207ENST00000520170 PLOD1Q02809 727 aaPredicted RBP19.24■□□□□ 0.67
HDAC2-207ENST00000520170 MCATQ8IVS2 390 aaKnown RBP19.24■□□□□ 0.67
HDAC2-207ENST00000520170 LMNTD1Q8N9Z9 388 aa19.24■□□□□ 0.67
HDAC2-207ENST00000520170 DLG3Q92796 817 aa19.24■□□□□ 0.67
HDAC2-207ENST00000520170 CIDEBQ9UHD4 219 aa19.24■□□□□ 0.67
HDAC2-207ENST00000520170 CDC23Q9UJX2 597 aa19.24■□□□□ 0.67
HDAC2-207ENST00000520170 OR1I1O60431 355 aa19.23■□□□□ 0.67
HDAC2-207ENST00000520170 ITGAXP20702 1163 aa19.23■□□□□ 0.67
HDAC2-207ENST00000520170 MMP11P24347 488 aa19.23■□□□□ 0.67
HDAC2-207ENST00000520170 FOXN2P32314 431 aa19.23■□□□□ 0.67
HDAC2-207ENST00000520170 PRAMEF13Q5VWM6 474 aa19.23■□□□□ 0.67
HDAC2-207ENST00000520170 OVCH1Q7RTY7 1134 aa19.23■□□□□ 0.67
HDAC2-207ENST00000520170 CFAP61Q8NHU2 1237 aa19.23■□□□□ 0.67
HDAC2-207ENST00000520170 WDR77Q9BQA1 342 aaPredicted RBP19.23■□□□□ 0.67
HDAC2-207ENST00000520170 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.23■□□□□ 0.67
HDAC2-207ENST00000520170 NOVA2Q9UNW9 492 aaKnown RBP19.23■□□□□ 0.67
HDAC2-207ENST00000520170 A0A1B0GX78 115 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 PSMD3O43242 534 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 PTMSP20962 102 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 PSMA3P25788 255 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 PKLRP30613 574 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 GRIA3P42263 894 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 RAB28P51157 221 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 ARSFP54793 590 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 GDF10P55107 478 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 HSPA14Q0VDF9 509 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 IRAK1BP1Q5VVH5 260 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 SHISA6Q6ZSJ9 500 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 TAX1BP1Q86VP1 789 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 KCNMB4Q86W47 210 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 PARP9Q8IXQ6 854 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 LINC01555Q8NAE3 123 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 ST6GALNAC3Q8NDV1 305 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 OR52K1Q8NGK4 314 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 DNAJB14Q8TBM8 379 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.22■□□□□ 0.67
HDAC2-207ENST00000520170 HDAC10Q969S8 669 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 FKBP10Q96AY3 582 aa19.22■□□□□ 0.67
HDAC2-207ENST00000520170 GOLGA6L9A6NEM1 432 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 SOCS6O14544 535 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 PIM1P11309 404 aaPredicted RBP19.21■□□□□ 0.67
HDAC2-207ENST00000520170 MCM3P25205 808 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 CCR7P32248 378 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 GCGRP47871 477 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 NKG7Q16617 165 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 P3H1Q32P28 736 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 DNAJC21Q5F1R6 531 aaKnown RBP19.21■□□□□ 0.67
HDAC2-207ENST00000520170 AGAP7PQ5VUJ5 663 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 VRK3Q8IV63 474 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 DENND1AQ8TEH3 1009 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 PPP4R1Q8TF05 950 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 NACC2Q96BF6 587 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 CNDP1Q96KN2 507 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 CALR3Q96L12 384 aaKnown RBP19.21■□□□□ 0.67
HDAC2-207ENST00000520170 AGAP4Q96P64 663 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 IL17FQ96PD4 163 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 TTC1Q99614 292 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 TMEM121Q9BTD3 319 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 TRIM5Q9C035 493 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 SOX17Q9H6I2 414 aaPredicted RBP19.21■□□□□ 0.67
HDAC2-207ENST00000520170 WDR54Q9H977 334 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 HS3ST3B1Q9Y662 390 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 EPN1Q9Y6I3 576 aaPredicted RBP19.21■□□□□ 0.67
HDAC2-207ENST00000520170 MYO7BQ6PIF6 2116 aa19.21■□□□□ 0.67
HDAC2-207ENST00000520170 SOWAHDA6NJG2 315 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 F8W8V4 182 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 DSCR3O14972 297 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 GOT2P00505 430 aaKnown RBP19.2■□□□□ 0.66
HDAC2-207ENST00000520170 ALBP02768 609 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 CD9P21926 228 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 SF1Q15637 639 aaKnown RBP19.2■□□□□ 0.66
HDAC2-207ENST00000520170 FIGLAQ6QHK4 219 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 KIRREL2Q6UWL6 708 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 COX15Q7KZN9 410 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 LINC00523Q86TU6 105 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 SLC22A15Q8IZD6 547 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 METTL27Q8N6F8 245 aaPredicted RBP19.2■□□□□ 0.66
HDAC2-207ENST00000520170 DNAAF3Q8N9W5 541 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 OR13J1Q8NGT2 312 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 GRHL3Q8TE85 626 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 SLC22A18Q96BI1 424 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 SPSB2Q99619 263 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 CUTCQ9NTM9 273 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 INTS7Q9NVH2 962 aaKnown RBP19.2■□□□□ 0.66
HDAC2-207ENST00000520170 SLC2A6Q9UGQ3 507 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 OSGIN2Q9Y236 505 aa19.2■□□□□ 0.66
HDAC2-207ENST00000520170 R3HDM2Q9Y2K5 976 aaKnown RBP19.2■□□□□ 0.66
HDAC2-207ENST00000520170 LRRTM2O43300 516 aa19.19■□□□□ 0.66
HDAC2-207ENST00000520170 GAS8O95995 478 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms