RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 MYCLP1P12525 358 aaPredicted RBP22.7■■□□□ 1.23
SLIT3-204ENST00000518140 ATP4BP51164 291 aa22.7■■□□□ 1.23
SLIT3-204ENST00000518140 OGFOD2Q6N063 350 aa22.7■■□□□ 1.23
SLIT3-204ENST00000518140 CHST15Q7LFX5 561 aaPredicted RBP22.7■■□□□ 1.23
SLIT3-204ENST00000518140 GUCD1Q96NT3 240 aa22.7■■□□□ 1.23
SLIT3-204ENST00000518140 APOOQ9BUR5 198 aa22.7■■□□□ 1.23
SLIT3-204ENST00000518140 DPEP2Q9H4A9 486 aa22.7■■□□□ 1.23
SLIT3-204ENST00000518140 KCNE1BA0A087WTH5 132 aa22.7■■□□□ 1.22
SLIT3-204ENST00000518140 SCAMP1O15126 338 aa22.7■■□□□ 1.22
SLIT3-204ENST00000518140 ACADSP16219 412 aa22.7■■□□□ 1.22
SLIT3-204ENST00000518140 MLF2Q15773 248 aaPredicted RBP22.7■■□□□ 1.22
SLIT3-204ENST00000518140 ULK2Q8IYT8 1036 aa22.7■■□□□ 1.22
SLIT3-204ENST00000518140 ZNF480Q8WV37 535 aa22.7■■□□□ 1.22
SLIT3-204ENST00000518140 WDR60Q8WVS4 1066 aa22.7■■□□□ 1.22
SLIT3-204ENST00000518140 TEX37Q96LM6 180 aa22.7■■□□□ 1.22
SLIT3-204ENST00000518140 ZNF490Q9ULM2 529 aaPredicted RBP22.7■■□□□ 1.22
SLIT3-204ENST00000518140 CFAP20Q9Y6A4 193 aaKnown RBP22.7■■□□□ 1.22
SLIT3-204ENST00000518140 FBP2O00757 339 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 LSM1O15116 133 aaKnown RBP22.69■■□□□ 1.22
SLIT3-204ENST00000518140 ULK1O75385 1050 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 CHRNB1P11230 501 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 FOSL2P15408 326 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 RPL10P27635 214 aaKnown RBP22.69■■□□□ 1.22
SLIT3-204ENST00000518140 NEK2P51955 445 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 HMGCS1Q01581 520 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 LEXMQ3ZCV2 418 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 METRNLQ641Q3 311 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 SCUBE1Q8IWY4 988 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 DSELQ8IZU8 1212 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 OXR1Q8N573 874 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 CCT7Q99832 543 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 SDR39U1Q9NRG7 319 aaPredicted RBP22.69■■□□□ 1.22
SLIT3-204ENST00000518140 RIC8BQ9NVN3 520 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 A6NHS1 94 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 H0Y8X5 98 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 KMOO15229 486 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 STX1BP61266 288 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 PLOD1Q02809 727 aaPredicted RBP22.69■■□□□ 1.22
SLIT3-204ENST00000518140 RFTN2Q52LD8 501 aaPredicted RBP22.69■■□□□ 1.22
SLIT3-204ENST00000518140 CAPRIN2Q6IMN6 1127 aaKnown RBP22.69■■□□□ 1.22
SLIT3-204ENST00000518140 SPATA19Q7Z5L4 167 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 ZNF687Q8N1G0 1237 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 FNDC5Q8NAU1 212 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 KYQ8NBH2 561 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 FBXO15Q8NCQ5 510 aaPredicted RBP22.69■■□□□ 1.22
SLIT3-204ENST00000518140 OR5AR1Q8NGP9 310 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 OR56A3Q8NH54 315 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 DNAJC9Q8WXX5 260 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 PLAGL1Q9UM63 463 aa22.69■■□□□ 1.22
SLIT3-204ENST00000518140 ACP5P13686 325 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 CD22P20273 847 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 CHIT1Q13231 466 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 NR6A1Q15406 480 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 ATP6AP1LQ52LC2 224 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 PDZD3Q86UT5 571 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 MIER2Q8N344 545 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 L3MBTL4Q8NA19 623 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 ATL1Q8WXF7 558 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 SPDL1Q96EA4 605 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 C1QTNF7Q9BXJ2 289 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 PFDN4Q9NQP4 134 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 AIG1Q9NVV5 245 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 SLC7A8Q9UHI5 535 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 PACSIN3Q9UKS6 424 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 ASF1AQ9Y294 204 aa22.68■■□□□ 1.22
SLIT3-204ENST00000518140 PDYNP01213 254 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 SNRPB2P08579 225 aaKnown RBP22.67■■□□□ 1.22
SLIT3-204ENST00000518140 VHLP40337 213 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 MAPK9P45984 424 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 RAP1GDS1P52306 607 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 ERVK-8P63133 956 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 AP5B1Q2VPB7 878 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 ANO7Q6IWH7 933 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 ARHGAP24Q8N264 748 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 OR9A1PQ8NGU1 263 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 USP7Q93009 1102 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 IL17FQ96PD4 163 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 MOSPD1Q9UJG1 213 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 SLC17A4Q9Y2C5 497 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 WDR37Q9Y2I8 494 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 E7EQ34 232 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 IDO1P14902 403 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 HALP42357 657 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 ACADVLP49748 655 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 PRKG2Q13237 762 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 KPNB1Q14974 876 aaKnown RBP22.67■■□□□ 1.22
SLIT3-204ENST00000518140 RPS6KA2Q15349 733 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 ZRSR2Q15696 482 aaKnown RBP22.67■■□□□ 1.22
SLIT3-204ENST00000518140 CCDC6Q16204 474 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 ZNF852Q6ZMS4 543 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 TRIM46Q7Z4K8 759 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 RGL4Q8IZJ4 473 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 PGBD3Q8N328 593 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 RNF175Q8N4F7 328 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 NUDT8Q8WV74 236 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 TFGQ92734 400 aaPredicted RBP22.67■■□□□ 1.22
SLIT3-204ENST00000518140 MSANTD3Q96H12 275 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 UHRF1Q96T88 793 aaPredicted RBP22.67■■□□□ 1.22
SLIT3-204ENST00000518140 EFCAB1Q9HAE3 211 aa22.67■■□□□ 1.22
SLIT3-204ENST00000518140 ITM2CQ9NQX7 267 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms