RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 NLNQ9BYT8 704 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 CHRAC1Q9NRG0 131 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 CTSFQ9UBX1 484 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 AMFRQ9UKV5 643 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 ASF1AQ9Y294 204 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 TDRKHQ9Y2W6 561 aaKnown RBP8.32□□□□□ -1.08
PABPC1-202ENST00000517403 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.32□□□□□ -1.08
PABPC1-202ENST00000517403 TCAF1Q9Y4C2 921 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 ICE1Q9Y2F5 2266 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 IGKV1-8A0A0C4DH67 115 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 A6NL46 340 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 C2orf74A8MZ97 194 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 GOLGA8KD6RF30 607 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 MKRN2OSH3BPM6 223 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 GOLGA8TH3BQL2 631 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 FFAR3O14843 346 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 GPR42O15529 346 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 S1PR4O95977 384 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 RAB40ALP0C0E4 278 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 CYP2A7P20853 494 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 PTMSP20962 102 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 NDUFS1P28331 727 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 HADHAP40939 763 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 GRIA3P42263 894 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 CD151P48509 253 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 NAP1L1P55209 391 aaKnown RBP8.31□□□□□ -1.08
PABPC1-202ENST00000517403 MC1RQ01726 317 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 FASTKQ14296 549 aaKnown RBP8.31□□□□□ -1.08
PABPC1-202ENST00000517403 GBX1Q14549 363 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 PRPSAP1Q14558 356 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 ITIH4Q14624 930 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 P3H1Q32P28 736 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.31□□□□□ -1.08
PABPC1-202ENST00000517403 FRMPD2BQ6IN97 320 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 JMJD6Q6NYC1 403 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-202ENST00000517403 MRPL14Q6P1L8 145 aaKnown RBP8.31□□□□□ -1.08
PABPC1-202ENST00000517403 SHISA6Q6ZSJ9 500 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 VASH1Q7L8A9 365 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-202ENST00000517403 SLC22A15Q8IZD6 547 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 METTL27Q8N6F8 245 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-202ENST00000517403 OR5K2Q8NHB8 316 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 CLIP3Q96DZ5 547 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 EFHD1Q9BUP0 239 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 SLC25A23Q9BV35 468 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 GPR87Q9BY21 358 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 MVB12BQ9H7P6 319 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 SLC6A20Q9NP91 592 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 RAB6BQ9NRW1 208 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 SYBUQ9NX95 663 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 SNX7Q9UNH6 387 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 PCDHGA9Q9Y5G4 932 aaKnown RBP8.31□□□□□ -1.08
PABPC1-202ENST00000517403 ANKRD12Q6UB98 2062 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 NBPF19A0A087WUL8 3843 aa8.31□□□□□ -1.08
PABPC1-202ENST00000517403 USP9YO00507 2555 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-202ENST00000517403 CPAMD8Q8IZJ3 1885 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 HIVEP3Q5T1R4 2406 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 SEC16AO15027 2179 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 LOC105369274A0A096LPK9 316 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 LOC102723532A0A0G2JNH3 316 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 A0A0J9YY10 115 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 MIF4GDA9UHW6 222 aaKnown RBP8.3□□□□□ -1.08
PABPC1-202ENST00000517403 TCP11X1B4DZS4 312 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 LIN7AO14910 233 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-202ENST00000517403 NIPSNAP2O75323 286 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 AVILO75366 819 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 AP2A2O94973 939 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 IFNB1P01574 187 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 MT-ND3P03897 115 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 MGAT1P26572 445 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 COL8A1P27658 744 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 AOAHP28039 575 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 OTX2P32243 289 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 NSG1P42857 185 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 ARL4DP49703 201 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 PGGT1BP53609 377 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 TERF1P54274 439 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 CCZ1BP86790 482 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 CCZ1P86791 482 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-202ENST00000517403 SRSF11Q05519 484 aaKnown RBP8.3□□□□□ -1.08
PABPC1-202ENST00000517403 RPA4Q13156 261 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 KYNUQ16719 465 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 COX20Q5RI15 118 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 MEI1Q5TIA1 1274 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 RHBDD2Q6NTF9 364 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 KLHL35Q6PF15 583 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 AFTPHQ6ULP2 937 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 OR4N4Q8N0Y3 316 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 CARFQ8N187 725 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 ARHGEF39Q8N4T4 335 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 CPT1BQ92523 772 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 MFSD3Q96ES6 412 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 C10orf90Q96M02 699 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 BIRC8Q96P09 236 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 ZNF552Q9H707 407 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-202ENST00000517403 PLAC1Q9HBJ0 212 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 FEZ2Q9UHY8 353 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-202ENST00000517403 GUCA1BQ9UMX6 200 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 COLEC10Q9Y6Z7 277 aa8.3□□□□□ -1.08
PABPC1-202ENST00000517403 LRRK2Q5S007 2527 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms