RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 GRIP1Q9Y3R0 1128 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FAM32AQ9Y421 112 aaKnown RBP3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF451Q9Y4E5 1061 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TESMINQ9Y4I5 508 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRIM17Q9Y577 477 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PCDHGB5Q9Y5G0 923 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PCDHGA8Q9Y5G5 932 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PCDHGA4Q9Y5G9 962 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TIMM13Q9Y5L4 95 aaPredicted RBP3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SNX10Q9Y5X0 201 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CPQQ9Y646 472 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 VWA8A3KMH1 1905 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 EP400Q96L91 3159 aa3.3□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HELZP42694 1942 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRBV5-4A0A0C4DH59 114 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GLYATL1P3A0A0U1RQE8 302 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HTR3EA5X5Y0 456 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FAM172BPA6NC97 362 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ASPDHA6ND91 283 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TMEM247A6NEH6 219 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR51F1A6NGY5 319 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NCF1BA6NI72 391 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PDZK1P1A8MUH7 402 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NCF1CA8MVU1 366 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MAGEB17A8MXT2 336 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MYO1GB0I1T2 1018 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CBX4O00257 560 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 UPK1AO00322 258 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MANBAO00462 879 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR7A17O14581 309 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ANKRD28O15084 1053 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MUSKO15146 869 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SEPT4O43236 478 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SUV39H1O43463 412 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 AIREO43918 545 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DFNA5O60443 496 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PEX10O60683 326 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 BCAS1O75363 584 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRIM3O75382 744 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 UPK1BO75841 260 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PDE9AO76083 593 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DDNO94850 711 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 AP2A2O94973 939 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PGLSO95336 258 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PRAMEF1O95521 474 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF682O95780 498 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TSPAN12O95859 305 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 POMCP01189 267 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RB1P06400 928 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GSTM1P09488 218 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CTSHP09668 335 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZDHHC11BP0C7U3 371 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRAPPC2P0DI81 140 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRAPPC2BP0DI82 140 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NCK1P16333 377 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF30P17039 623 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PTPN2P17706 415 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GPX2P18283 190 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NELFEP18615 380 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TSPAN8P19075 237 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HDCP19113 662 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CR2P20023 1033 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 EFNA1P20827 205 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MATN1P21941 496 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PCMT1P22061 227 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CFL1P23528 166 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ACRV1P26436 265 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HTR1BP28222 390 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HOXD9P28356 352 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GGT5P36269 586 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 THPOP40225 353 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OPRL1P41146 370 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ETV6P41212 452 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HNF4AP41235 474 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CTSKP43235 329 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 BRCC3P46736 316 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR1G1P47890 313 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZFP36L2P47974 494 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ANXA11P50995 505 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FOXA1P55317 472 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FCGRTP55899 365 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR4D2P58180 307 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SMIM11AP58511 58 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ERVPABLB-1P60509 514 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 POLR2LP62875 67 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PHC1P78364 1004 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 EMX1Q04741 257 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RUNX1T1Q06455 604 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 BCL2L1Q07817 233 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CD47Q08722 323 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FCHO2Q0JRZ9 810 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TAF10Q12962 218 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MTAPQ13126 283 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CDK5R2Q13319 367 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NFATC2Q13469 925 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CAMK2GQ13555 558 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CDH18Q13634 790 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ARHGEF7Q14155 803 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SELPLGQ14242 412 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms