RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 PPANQ9NQ55 473 aaKnown RBP4.26□□□□□ -1.73
SMARCA5-203ENST00000515531 PIH1D3Q9NQM4 214 aaKnown RBP4.26□□□□□ -1.73
SMARCA5-203ENST00000515531 ZDHHC18Q9NUE0 388 aa4.26□□□□□ -1.73
SMARCA5-203ENST00000515531 RASAL2Q9UJF2 1139 aa4.26□□□□□ -1.73
SMARCA5-203ENST00000515531 A0A087X002 238 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 TCRBV21S2A2A0A5A6 115 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 HMGB1P1B2RPK0 211 aaPredicted RBP4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 ARHGEF9O43307 516 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 TOMM70O94826 608 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 IGHV4-31P0DP07 118 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 CDH3P22223 829 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 MAZP56270 477 aaKnown RBP4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 BECN1Q14457 450 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 LETM2Q2VYF4 491 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 MFSD4BQ5TF39 518 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 ZNF772Q68DY9 489 aaPredicted RBP4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 MFSD12Q6NUT3 480 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 Q6ZSR9 355 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 ARHGAP22Q7Z5H3 698 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 TMPRSS11BQ86T26 416 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 PRPF39Q86UA1 669 aaKnown RBP4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 RAB42Q8N4Z0 105 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 POGLUT1Q8NBL1 392 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 DBF4BQ8NFT6 615 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 DYRK2Q92630 601 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 LINC00479Q96M42 142 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 GFRA4Q9GZZ7 299 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 CPVLQ9H3G5 476 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 PLCXD1Q9NUJ7 323 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 OLAHQ9NV23 265 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 TAB2Q9NYJ8 693 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 KLHL8Q9P2G9 620 aaPredicted RBP4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 ANAPC2Q9UJX6 822 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 GRID1Q9ULK0 1009 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 TRPV2Q9Y5S1 764 aa4.25□□□□□ -1.73
SMARCA5-203ENST00000515531 FEZF1A0PJY2 475 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 IGHV2-70P01814 119 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 NKX2-1P43699 371 aaPredicted RBP4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 CAPZA2P47755 286 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 SLC6A12P48065 614 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 LUMP51884 338 aaPredicted RBP4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 ZNF415Q09FC8 603 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 SNTB1Q13884 538 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 IL11RAQ14626 422 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 SGSM1Q2NKQ1 1148 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 FAM198BQ6UWH4 519 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 ZNF497Q6ZNH5 498 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 PCGF5Q86SE9 256 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 TC2NQ8N9U0 490 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 ZNF485Q8NCK3 441 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 OR13C3Q8NGS6 347 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 OR52N5Q8NH56 324 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 SECISBP2LQ93073 1101 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 SYT15Q9BQS2 421 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 FUCA2Q9BTY2 467 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 NOL11Q9H8H0 719 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 ANKZF1Q9H8Y5 726 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 ERVMER34-1Q9H9K5 563 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 Q9N2K0 584 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 P4HTMQ9NXG6 502 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 BARHL2Q9NY43 387 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 ABT1Q9ULW3 272 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 EXOGQ9Y2C4 368 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 TRIM17Q9Y577 477 aa4.24□□□□□ -1.73
SMARCA5-203ENST00000515531 SNED1Q8TER0 1413 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 EDDM13A0A1B0GTR0 161 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 ANTXRLA6NF34 631 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 NEMP2A6NFY4 417 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 ENO4A6NNW6 628 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 EPHB6O15197 1021 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 GPIP06744 558 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 AKR1B1P15121 316 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 TYMPP19971 482 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 CSTF2P33240 577 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 PCGF2P35227 344 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 CLK1P49759 484 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 CCR3P51677 355 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 MAPK12P53778 367 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 SQLEQ14534 574 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 UGP2Q16851 508 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 KLHL26Q53HC5 615 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 C9orf152Q5JTZ5 239 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 KIRREL3Q8IZU9 778 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 THAP8Q8NA92 274 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 ZNF599Q96NL3 588 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 CLEC7AQ9BXN2 247 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 OR2B2Q9GZK3 357 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 EGLN1Q9GZT9 426 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 CNOT10Q9H9A5 744 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 TRPV4Q9HBA0 871 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 FAM207AQ9NSI2 230 aaPredicted RBP4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 PRMT7Q9NVM4 692 aaPredicted RBP4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 OR6C2Q9NZP2 312 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 CPSF3Q9UKF6 684 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 TNNQ9UQP3 1299 aa4.23□□□□□ -1.73
SMARCA5-203ENST00000515531 C2orf81A6NN90 581 aa4.22□□□□□ -1.73
SMARCA5-203ENST00000515531 CYSRT1A8MQ03 144 aa4.22□□□□□ -1.73
SMARCA5-203ENST00000515531 RAB40ALP0C0E4 278 aa4.22□□□□□ -1.73
SMARCA5-203ENST00000515531 CCR10P46092 362 aa4.22□□□□□ -1.73
SMARCA5-203ENST00000515531 MAT1AQ00266 395 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms