RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 FBXO15Q8NCQ5 510 aaPredicted RBP12.34□□□□□ -0.43
CLCN3-210ENST00000515420 ELMO2Q96JJ3 720 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 AARSD1Q9BTE6 412 aaKnown RBP12.34□□□□□ -0.43
CLCN3-210ENST00000515420 SLC12A9Q9BXP2 914 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 TRIM31Q9BZY9 425 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 PHACTR1Q9C0D0 580 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 FAM114A2Q9NRY5 505 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 IARS2Q9NSE4 1012 aaKnown RBP12.34□□□□□ -0.43
CLCN3-210ENST00000515420 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 SERTAD3Q9UJW9 196 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 KCND3Q9UK17 655 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 RALYQ9UKM9 306 aaKnown RBP12.34□□□□□ -0.43
CLCN3-210ENST00000515420 PADI1Q9ULC6 663 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 PLAGL1Q9UM63 463 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 CHMP2BQ9UQN3 213 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 PCDHGA6Q9Y5G7 932 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 NFS1Q9Y697 457 aa12.34□□□□□ -0.43
CLCN3-210ENST00000515420 SEC16AO15027 2179 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 ISM1B1AKI9 464 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 C21orf140B9A014 251 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 TMEM150CB9EJG8 249 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 MYO1CO00159 1063 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 TERTO14746 1132 aaKnown RBP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 EIF3HO15372 352 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 SCRG1O75711 98 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 RECKO95980 971 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 CATP04040 527 aaKnown RBP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 TUBB4AP04350 444 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 HBQ1P09105 142 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 ERVK-10P10266 1014 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 ERGP11308 486 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 WT1P19544 449 aaPredicted RBP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 HSD17B2P37059 387 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 MPP1Q00013 466 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 NAA25Q14CX7 972 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 KLHL38Q2WGJ6 581 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 ACSBG2Q5FVE4 666 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 KIAA1614Q5VZ46 1190 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 DUPD1Q68J44 220 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 CNSTQ6PJW8 725 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 ZNF517Q6ZMY9 492 aaPredicted RBP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 CDHR3Q6ZTQ4 885 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 UNC5BQ8IZJ1 945 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 GIMAP7Q8NHV1 300 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 CD200R1Q8TD46 325 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 INPP5DQ92835 1189 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 CATSPER2Q96P56 530 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 WDR83Q9BRX9 315 aaKnown RBP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 PLAC1Q9HBJ0 212 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 LHX9Q9NQ69 397 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 INTS7Q9NVH2 962 aaKnown RBP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 TAS2R13Q9NYV9 303 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 GALPQ9UBC7 116 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 UTP11Q9Y3A2 253 aaKnown RBP12.33□□□□□ -0.44
CLCN3-210ENST00000515420 KLK4Q9Y5K2 254 aa12.33□□□□□ -0.44
CLCN3-210ENST00000515420 ZNF839A8K0R7 811 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 ARHGEF33A8MVX0 844 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 GFYI3L273 518 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 RAD51CO43502 376 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 PRICKLE3O43900 615 aaPredicted RBP12.32□□□□□ -0.44
CLCN3-210ENST00000515420 PVRP15151 417 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 CYP2A7P20853 494 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 OAS2P29728 719 aaKnown RBP12.32□□□□□ -0.44
CLCN3-210ENST00000515420 BDKRB1P46663 353 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 GABRA4P48169 554 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 ITGA1P56199 1179 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 CAV1Q03135 178 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 C2orf54Q08AI8 447 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 PDIA2Q13087 525 aaKnown RBP12.32□□□□□ -0.44
CLCN3-210ENST00000515420 CYP2A13Q16696 494 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 TEDDM1Q5T9Z0 273 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 PCSK4Q6UW60 755 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 TRIM73Q86UV7 250 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 GPR135Q8IZ08 494 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 LMNTD1Q8N9Z9 388 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 OR9A1PQ8NGU1 263 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 OR1L3Q8NH93 324 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 DENND1AQ8TEH3 1009 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 ASB11Q8WXH4 323 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 STARD8Q92502 1023 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 SEC14L1Q92503 715 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 N4BP2L2Q92802 583 aaPredicted RBP12.32□□□□□ -0.44
CLCN3-210ENST00000515420 FAM136AQ96C01 138 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 BBC3Q96PG8 261 aaPredicted RBP12.32□□□□□ -0.44
CLCN3-210ENST00000515420 GPR21Q99679 349 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 SLC30A3Q99726 388 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 DPH2Q9BQC3 489 aaPredicted RBP12.32□□□□□ -0.44
CLCN3-210ENST00000515420 GPR87Q9BY21 358 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 RAB17Q9H0T7 212 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 ENAMQ9NRM1 1142 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 NSMCE4AQ9NXX6 385 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 TRMT6Q9UJA5 497 aaKnown RBP12.32□□□□□ -0.44
CLCN3-210ENST00000515420 CDC23Q9UJX2 597 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 CROTQ9UKG9 612 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 RUVBL2Q9Y230 463 aaKnown RBP12.32□□□□□ -0.44
CLCN3-210ENST00000515420 SNX24Q9Y343 169 aa12.32□□□□□ -0.44
CLCN3-210ENST00000515420 AP1M2Q9Y6Q5 423 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms