RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CLIC2O15247 247 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 FDPSP14324 419 aaKnown RBP4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 MNDAP41218 407 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 TFCP2Q12800 502 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 MCMDC2Q4G0Z9 681 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 XKR3Q5GH77 459 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 TCTE1Q5JU00 501 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 SLC35E4Q6ICL7 350 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 C11orf63Q6NUN7 778 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 USP43Q70EL4 1123 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 ISCA2Q86U28 154 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 NUDT13Q86X67 352 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 CCAR2Q8N163 923 aaKnown RBP4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 PIGBQ92521 554 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 Q9H8V8 135 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 CDH20Q9HBT6 801 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 DNAJC4Q9NNZ3 241 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 SIX2Q9NPC8 291 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 WDR83OSQ9Y284 106 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 A0A1W2PN81 502 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 ATP6V0E1O15342 81 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 PRKRAO75569 313 aaKnown RBP4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 NGFP01138 241 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 PRSS1P07477 247 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 INHBAP08476 426 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 ERVK-10P10266 1014 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 TCF4P15884 667 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 IFNAR1P17181 557 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 EFNA1P20827 205 aaPredicted RBP4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 CHRNA7P36544 502 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 TAF10Q12962 218 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 VEZF1Q14119 521 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 P2RY6Q15077 328 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 SFMBT2Q5VUG0 894 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 DCLRE1AQ6PJP8 1040 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 CEACAM20Q6UY09 585 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 MFSD6Q6ZSS7 791 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 KRT77Q7Z794 578 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 RTN4RL2Q86UN3 420 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 MMD2Q8IY49 270 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 THNSL1Q8IYQ7 743 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 IQUBQ8NA54 791 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 OR10V1Q8NGI7 309 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 VANGL1Q8TAA9 524 aaPredicted RBP4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 THOC1Q96FV9 657 aaKnown RBP4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 KATNB1Q9BVA0 655 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 SLC2A11Q9BYW1 496 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 ECHDC1Q9NTX5 307 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 ADPRHL2Q9NX46 363 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 TBC1D7Q9P0N9 293 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 TRIM17Q9Y577 477 aa4.67□□□□□ -1.66
HMGCS1-207ENST00000514610 PRR23D1E9PI22 279 aaPredicted RBP4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 PRR23D2P0DMB1 279 aaPredicted RBP4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 EPCAMP16422 314 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 EEF1B2P24534 225 aaKnown RBP4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 CD27P26842 260 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 HOXC8P31273 242 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 CLDN15P56746 228 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 PPARDQ03181 441 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 ODF4Q2M2E3 257 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 CYP4A22Q5TCH4 519 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 FAM219AQ8IW50 185 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 ZNF611Q8N823 705 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 KBTBD8Q8NFY9 601 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 TRIM58Q8NG06 486 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 PHLDA1Q8WV24 401 aaPredicted RBP4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 SPATA33Q96N06 139 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 RAB3IPQ96QF0 476 aaPredicted RBP4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 MGME1Q9BQP7 344 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 SLC52A3Q9NQ40 469 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 SPHK1Q9NYA1 384 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 POLLQ9UGP5 575 aa4.66□□□□□ -1.66
HMGCS1-207ENST00000514610 ANKRD61A6NGH8 418 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 PMS2P5A8MQ11 134 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 ZNF197O14709 1029 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 CD48P09326 243 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 IGHV4-31P0DP07 118 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 SAGP10523 405 aaPredicted RBP4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 CDC25CP30307 473 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 CEACAM8P31997 349 aaPredicted RBP4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 GP5P40197 560 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 GPR17Q13304 367 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 NPTX1Q15818 432 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 LBHQ53QV2 105 aaPredicted RBP4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 C6orf136Q5SQH8 315 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 CAVIN1Q6NZI2 390 aaKnown RBP4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 ADCK2Q7Z695 626 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 ABI3BPQ7Z7G0 1075 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 GLRX5Q86SX6 157 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 CDK20Q8IZL9 346 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 EID3Q8N140 333 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 NKAIN3Q8N8D7 197 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 DNASE2BQ8WZ79 361 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 TMEM143Q96AN5 459 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 ZNF501Q96CX3 271 aaPredicted RBP4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 NSL1Q96IY1 281 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 RMDN2Q96LZ7 410 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 SH3GLB2Q9NR46 395 aa4.65□□□□□ -1.67
HMGCS1-207ENST00000514610 IGHV4-61A0A0C4DH41 118 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms