RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SRRM1Q8IYB3 904 aaKnown RBP10.97□□□□□ -0.65
HTT-213ENST00000513806 CHCHD4Q8N4Q1 142 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 RCBTB1Q8NDN9 531 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 ZNF480Q8WV37 535 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 RAD51AP1Q96B01 352 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 PYCR2Q96C36 320 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 MTBPQ96DY7 904 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 GFM1Q96RP9 751 aaKnown RBP10.97□□□□□ -0.65
HTT-213ENST00000513806 ACAT2Q9BWD1 397 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 ROPN1BQ9BZX4 212 aaPredicted RBP10.97□□□□□ -0.65
HTT-213ENST00000513806 UCK1Q9HA47 277 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 ROPN1Q9HAT0 212 aaPredicted RBP10.97□□□□□ -0.65
HTT-213ENST00000513806 PARVBQ9HBI1 364 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 ACSS2Q9NR19 701 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 EVA1BQ9NVM1 165 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 ARL15Q9NXU5 204 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 ACTR10Q9NZ32 417 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 TMEM216Q9P0N5 145 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 STOX2Q9P2F5 926 aaPredicted RBP10.97□□□□□ -0.65
HTT-213ENST00000513806 POLG2Q9UHN1 485 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 LGALS13Q9UHV8 139 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 RNF112Q9ULX5 631 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 SH2B3Q9UQQ2 575 aa10.97□□□□□ -0.65
HTT-213ENST00000513806 A0A1W2PPV9 198 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 SUPT3HB4E1H0 165 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 D6RAR5 112 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 AGPSO00116 658 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 TK2O00142 265 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 SLC16A5O15375 505 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 NRP2O60462 931 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 SUPT3HO75486 399 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 SASH3O75995 380 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 DKK1O94907 266 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 GP1BAP07359 652 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 SBK3P0C264 359 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 SHMT2P34897 504 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 CCNFP41002 786 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 SEPHS1P49903 392 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 RAB28P51157 221 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 PNLIPRP1P54315 467 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 EPHA4P54764 986 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 ATP6V0D1P61421 351 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 FOXC1Q12948 553 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 TGFBIQ15582 683 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 TECRLQ5HYJ1 363 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 PHF19Q5T6S3 580 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 FAM219BQ5XKK7 198 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 TTC23LQ6PF05 361 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 FRA10AC1Q70Z53 315 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 TRABD2AQ86V40 505 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 OOSP2Q86WS3 158 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 GPSM1Q86YR5 675 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 RBM12BQ8IXT5 1001 aaKnown RBP10.96□□□□□ -0.65
HTT-213ENST00000513806 AVL9Q8NBF6 648 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 FLVCR1-AS1Q8TAF5 88 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 KIAA1191Q96A73 305 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 MOCOSQ96EN8 888 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 MED8Q96G25 268 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 CCDC74BQ96LY2 380 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 ATOH8Q96SQ7 321 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 MAP3K3Q99759 626 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 EGFL8Q99944 293 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 TMEM109Q9BVC6 243 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 NMRAL1Q9HBL8 299 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 ARGLU1Q9NWB6 273 aaPredicted RBP10.96□□□□□ -0.65
HTT-213ENST00000513806 ZNF446Q9NWS9 450 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.96□□□□□ -0.65
HTT-213ENST00000513806 CPSF2Q9P2I0 782 aaKnown RBP10.96□□□□□ -0.65
HTT-213ENST00000513806 XPR1Q9UBH6 696 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 APOBEC2Q9Y235 224 aaKnown RBP10.96□□□□□ -0.65
HTT-213ENST00000513806 OARD1Q9Y530 152 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 ASB1Q9Y576 335 aa10.96□□□□□ -0.65
HTT-213ENST00000513806 KNTC1P50748 2209 aa10.96□□□□□ -0.66
HTT-213ENST00000513806 IGHV5-10-1A0A0J9YXX1 117 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 PIPSLA2A3N6 862 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 RGS16O15492 202 aaPredicted RBP10.95□□□□□ -0.66
HTT-213ENST00000513806 TAPBPO15533 448 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 HYAL3O43820 417 aaPredicted RBP10.95□□□□□ -0.66
HTT-213ENST00000513806 CSO75390 466 aaKnown RBP10.95□□□□□ -0.66
HTT-213ENST00000513806 CPNE6O95741 557 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 MT-CO3P00414 261 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 HGFP14210 728 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 UGT2B7P16662 529 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 KRT4P19013 534 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 GDF5P43026 501 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 AGTR2P50052 363 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 TBPL1P62380 186 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 GPLD1P80108 840 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 ILF2Q12905 390 aaKnown RBP10.95□□□□□ -0.66
HTT-213ENST00000513806 SP140Q13342 867 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 ILKQ13418 452 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 NAE1Q13564 534 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 PUM1Q14671 1186 aaKnown RBP eCLIP10.95□□□□□ -0.66
HTT-213ENST00000513806 CYP2A13Q16696 494 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 FAM83EQ2M2I3 478 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 CDCP2Q5VXM1 449 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 ARMC6Q6NXE6 501 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 AGTRAPQ6RW13 159 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 LRIG3Q6UXM1 1119 aa10.95□□□□□ -0.66
HTT-213ENST00000513806 RPS27LQ71UM5 84 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms