RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 TMEM196Q5HYL7 178 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 FAM72AQ5TYM5 149 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 TXNRD3NBQ6F5E7 133 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 FAM72DQ6L9T8 149 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 CXorf57Q6NSI4 855 aaKnown RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 SCYL2Q6P3W7 929 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 LRRC31Q6UY01 552 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 ZNF852Q6ZMS4 543 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 RFX8Q6ZV50 586 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 ANKS1BQ7Z6G8 1248 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 SETD3Q86TU7 594 aaPredicted RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 NT5DC3Q86UY8 548 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 NLRP14Q86W24 1093 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 FAM72BQ86X60 149 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 MFN1Q8IWA4 741 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 KATNAL2Q8IYT4 538 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 LGI2Q8N0V4 545 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 CCAR2Q8N163 923 aaKnown RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 PYROXD2Q8N2H3 581 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 TRIM58Q8NG06 486 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 FIBINQ8TAL6 211 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 DDI1Q8WTU0 396 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 HSPH1Q92598 858 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 IGSF8Q969P0 613 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 FAF2Q96CS3 445 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 TBC1D31Q96DN5 1066 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 TMA16Q96EY4 203 aaKnown RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 LMLNQ96KR4 655 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 RPRD1AQ96P16 312 aaPredicted RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 ALS2CR12Q96Q35 445 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 XPO6Q96QU8 1125 aaKnown RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 P2RY13Q9BPV8 354 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 GATA5Q9BWX5 397 aaPredicted RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 ZYG11BQ9C0D3 744 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 GOLPH3Q9H4A6 298 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 CATSPERBQ9H7T0 1116 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 ZWILCHQ9H900 591 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 LZTFL1Q9NQ48 299 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 DNAJC17Q9NVM6 304 aaKnown RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 TMEM248Q9NWD8 314 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 GPATCH2LQ9NWQ4 482 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 DDX56Q9NY93 547 aaKnown RBP4.78□□□□□ -1.64
SNX25-206ENST00000513433 DONSONQ9NYP3 566 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 PCSK1NQ9UHG2 260 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 VANGL2Q9ULK5 521 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 PYCARDQ9ULZ3 195 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 GUCA1BQ9UMX6 200 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNX25-206ENST00000513433 ALG6Q9Y672 507 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 BPTFQ12830 3046 aa4.78□□□□□ -1.64
SNX25-206ENST00000513433 TEP1Q99973 2627 aaKnown RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 F5P12259 2224 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 SHROOM3Q8TF72 1996 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 KANSL1LA0AUZ9 987 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 EME2A4GXA9 379 aaPredicted RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 C3orf70A6NLC5 250 aaPredicted RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 H0Y626 953 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 EEF2KO00418 725 aaKnown RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 CREB3O43889 395 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 PIAS2O75928 621 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 KRT38O76015 456 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 KAT7O95251 611 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 MOCS3O95396 460 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 CISD3P0C7P0 127 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 GOT1P17174 413 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 BTF3P20290 206 aaKnown RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 DRD1P21728 446 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 SERPINB6P35237 376 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 GJC1P36383 396 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 SSR1P43307 286 aaKnown RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 MAGEA9P43362 315 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 MARCKSL1P49006 195 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 NAP1L1P55209 391 aaKnown RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 CDH6P55285 790 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 KDSRQ06136 332 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 GRSF1Q12849 480 aaKnown RBP eCLIP4.77□□□□□ -1.65
SNX25-206ENST00000513433 ZNF177Q13360 481 aaPredicted RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 DNASE1L3Q13609 305 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 SLC12A1Q13621 1099 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 DPYSL3Q14195 570 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 KRT81Q14533 505 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 SLC29A2Q14542 456 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 DMC1Q14565 340 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 TAZQ16635 292 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 PARP15Q460N3 678 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 FUT11Q495W5 492 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 FBXO43Q4G163 708 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 PPP6R3Q5H9R7 873 aaPredicted RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 KCNT1Q5JUK3 1230 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 COLCA1Q6ZS62 124 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 PEX26Q7Z412 305 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 C14orf80Q86SX3 495 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 MAP7D3Q8IWC1 876 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 CCDC117Q8IWD4 279 aaPredicted RBP4.77□□□□□ -1.65
SNX25-206ENST00000513433 CCDC105Q8IYK2 499 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 KRT78Q8N1N4 520 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 NPWQ8N729 165 aa4.77□□□□□ -1.65
SNX25-206ENST00000513433 RTL3Q8N8U3 475 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms