RNA–Protein interactions for RNA: ENST00000511496.5

LIMCH1-213, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-213ENST00000511496 CNTN6Q9UQ52 1028 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 MGAT4BQ9UQ53 548 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 V9GYH0 126 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 TRPM3Q9HCF6 1732 aaPredicted RBP11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 H3BM21 787 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 EPOP01588 193 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 HRGP04196 525 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 FLI1Q01543 452 aaPredicted RBP11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 SAXO2Q658L1 398 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 DENND6AQ8IWF6 608 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 SVOPLQ8N434 492 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 OR7G3Q8NG95 312 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 NANPQ8TBE9 248 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 FAM149B1Q96BN6 582 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 TCEAL9Q9UHQ7 104 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 FABP12A6NFH5 140 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 A8MT66 165 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 FZD9O00144 591 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 KCNK1O00180 336 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 JUPP14923 745 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 NPR1P16066 1061 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 CD72P21854 359 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 CLCNKAP51800 687 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 ZNF143P52747 638 aaPredicted RBP11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 GPR158Q5T848 1215 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 TRNP1Q6NT89 227 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 CCDC149Q6ZUS6 474 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 ADHFE1Q8IWW8 467 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 OR5K1Q8NHB7 308 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 DNASE1L2Q92874 299 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 MYO19Q96H55 970 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 ZSWIM3Q96MP5 696 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 KCNA7Q96RP8 456 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 GPR22Q99680 433 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 SHARPINQ9H0F6 387 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 RERGLQ9H628 205 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 STARD7Q9NQZ5 370 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 SPATA2Q9UM82 520 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 PLCL2Q9UPR0 1127 aa11.79□□□□□ -0.52
LIMCH1-213ENST00000511496 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 STX16O14662 325 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 IPO13O94829 963 aaKnown RBP11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 CSF3P09919 207 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 MEOX2P50222 304 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 RAB10P61026 200 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 ASAH1Q13510 395 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 CLLU1Q5K131 121 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 GPR139Q6DWJ6 353 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 SCIMPQ6UWF3 145 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 RASGRP3Q8IV61 690 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 TTC29Q8NA56 475 aaPredicted RBP11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 TEX47Q8TBZ9 253 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 YIPF5Q969M3 257 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 FAM162AQ96A26 154 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 DIRAS2Q96HU8 199 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 TEPSINQ96N21 525 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 ST6GALNAC4Q9H4F1 302 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 ZNF768Q9H5H4 540 aaKnown RBP11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 ASAH2Q9NR71 780 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 GINS2Q9Y248 185 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 TNPO3Q9Y5L0 923 aaKnown RBP11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 PCDH17O14917 1159 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 PLA2G10O15496 165 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 PLOD3O60568 738 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 LYPLA2O95372 231 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 CFDP00746 253 aaPredicted RBP11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 NMBRP28336 390 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 HUNKP57058 714 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 UFM1P61960 85 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 RUNX1T1Q06455 604 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 MXD4Q14582 209 aaPredicted RBP11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 MAD2L1BPQ15013 274 aaPredicted RBP11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 SNAPC1Q16533 368 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 UGCGQ16739 394 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 HSD17B12Q53GQ0 312 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 SRFBP1Q8NEF9 429 aaKnown RBP11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 OR4D10Q8NGI6 311 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 SENP8Q96LD8 212 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 GPR137Q96N19 417 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 KCTD5Q9NXV2 234 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 UBP1Q9NZI7 540 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 MALT1Q9UDY8 824 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 MLXQ9UH92 298 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 TINAGQ9UJW2 476 aa11.78□□□□□ -0.52
LIMCH1-213ENST00000511496 FAM95CA0A1B0GW59 222 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 SMIM30A4D0T7 59 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 C2orf81A6NN90 581 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 FZD6O60353 706 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 PSIP1O75475 530 aaKnown RBP11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 ATG7O95352 703 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 HSD17B2P37059 387 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 RGS6P49758 472 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 CDH8P55286 799 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 TAS2R39P59534 338 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 CREMQ03060 361 aa11.77□□□□□ -0.52
LIMCH1-213ENST00000511496 MED22Q15528 200 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms