RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ZIM2Q9NZV7 527 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 CDH7Q9ULB5 785 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 PCDHGB7Q9Y5F8 929 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 SLIT3O75094 1523 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 OR51F1A6NGY5 319 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 LRRC72A6NJI9 287 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 KLF11O14901 512 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 ZNF823P16415 610 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 UGT1A6P19224 532 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 UGT1A1P22309 533 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 UGT1A4P22310 534 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 UGT1A3P35503 534 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 GRIA1P42261 906 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 CAP1Q01518 475 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 DSC3Q14574 896 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 CRB2Q5IJ48 1285 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 GET4Q7L5D6 327 aaPredicted RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 LGI4Q8N135 537 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 SMG8Q8ND04 991 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 C2orf15Q8WU43 125 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 SMG7Q92540 1137 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 TMBIM1Q969X1 311 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 MIPEPQ99797 713 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 CHIAQ9BZP6 476 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 EHD1Q9H4M9 534 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 ELAC1Q9H777 363 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 THUMPD1Q9NXG2 353 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 B3GALT2O43825 422 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 ECI2O75521 394 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 HLA-DQB2P05538 268 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 AP1S2P56377 157 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 MVKQ03426 396 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 FOXM1Q08050 763 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 TLR1Q15399 786 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 ADGRG6Q86SQ4 1221 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 POF1BQ8WVV4 589 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 LGR4Q9BXB1 951 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 RC3H2Q9HBD1 1191 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 MED11Q9P086 117 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 NKX1-2Q9UD57 310 aaPredicted RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 RIMKLBQ9ULI2 386 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 TLR6Q9Y2C9 796 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 IRAK2O43187 625 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 SIX3O95343 332 aaPredicted RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 SLC2A2P11168 524 aaPredicted RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 ACVR2AP27037 513 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 MASP1P48740 699 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 CEBPGP53567 150 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 KCNJ11Q14654 390 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 SYT16Q17RD7 645 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 SOWAHAQ2M3V2 549 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 MCEMP1Q8IX19 187 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 CNDP2Q96KP4 475 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 RPL10LQ96L21 214 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 KCNC2Q96PR1 638 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 GAL3ST4Q96RP7 486 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 C1orf21Q9H246 121 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 CTPS2Q9NRF8 586 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 DUS2Q9NX74 493 aaKnown RBP10.38□□□□□ -0.75
NEK1-206ENST00000510533 FZD4Q9ULV1 537 aa10.38□□□□□ -0.75
NEK1-206ENST00000510533 CLIC1O00299 241 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 FKTNO75072 461 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 NIPSNAP2O75323 286 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 HMGN1P05114 100 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 ITIH1P19827 911 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 NCBP2P52298 156 aaKnown RBP eCLIP10.37□□□□□ -0.75
NEK1-206ENST00000510533 HMGCS1Q01581 520 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 BNIP3Q12983 259 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 CBLBQ13191 982 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 ZNF234Q14588 700 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 GPR33Q49SQ1 333 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 ARMCX6Q7L4S7 300 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 ZNF615Q8N8J6 731 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 OR5T3Q8NGG3 340 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 ZNF317Q96PQ6 595 aaPredicted RBP10.37□□□□□ -0.75
NEK1-206ENST00000510533 DCSTAMPQ9H295 470 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 FLRT1Q9NZU1 646 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 PLIN4Q96Q06 1357 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 TLR4O00206 839 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 PLOD2O00469 737 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 DUSP11O75319 330 aaKnown RBP10.37□□□□□ -0.75
NEK1-206ENST00000510533 LINGO3P0C6S8 592 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 SCNN1AP37088 669 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 WSCD2Q2TBF2 565 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 ALKBH2Q6NS38 261 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 MBOAT1Q6ZNC8 495 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 NPAS4Q8IUM7 802 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 OR2L3Q8NG85 312 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 NKD1Q969G9 470 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 PRICKLE1Q96MT3 831 aaPredicted RBP10.37□□□□□ -0.75
NEK1-206ENST00000510533 ZNF599Q96NL3 588 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 LPIN3Q9BQK8 851 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 ITPAQ9BY32 194 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 TLE6Q9H808 572 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 VPS29Q9UBQ0 182 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 SOWAHBA6NEL2 793 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 TSPAN4O14817 238 aa10.37□□□□□ -0.75
NEK1-206ENST00000510533 SMPD1P17405 629 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms