RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 GALPQ9UBC7 116 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 SNX12Q9UMY4 172 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 SNX7Q9UNH6 387 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 TP53TG5Q9Y2B4 290 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 MAD1L1Q9Y6D9 718 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 GOLGA6L10A0A0M3HER8 536 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 ARGFXA6NJG6 315 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 K7EM74 188 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 RASGRF2O14827 1237 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 PFDN6O15212 129 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 CHRM3P20309 590 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 PSMB5P28074 263 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 PPP1R7Q15435 360 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 UGT8Q16880 541 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 SLC5A12Q1EHB4 618 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 TYSND1Q2T9J0 566 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 ANKRD20A4Q4UJ75 823 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 RNF187Q5TA31 235 aaPredicted RBP14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 CPZQ66K79 652 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 NEPROQ6NW34 567 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 TTC23LQ6PF05 361 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 FAM198BQ6UWH4 519 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 ATG14Q6ZNE5 492 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 CENPUQ71F23 418 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 SYVN1Q86TM6 617 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 AGGF1Q8N302 714 aaeCLIP14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 ZNF655Q8N720 491 aaPredicted RBP14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 ACTRT1Q8TDG2 376 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 CAPZA3Q96KX2 299 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 TRIM55Q9BYV6 548 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 XAB2Q9HCS7 855 aaKnown RBP14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 FBXO6Q9NRD1 293 aaPredicted RBP14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 DHCR7Q9UBM7 475 aaKnown RBP14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 TUBD1Q9UJT1 453 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 NEU2Q9Y3R4 380 aa14.27□□□□□ -0.13
UBE2D3-228ENST00000508974 FAM237BA0A1B0GVD1 139 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 CTAGE9A4FU28 777 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 SDR42E2A6NKP2 422 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 E5RI56 91 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 KPNA5O15131 536 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 SUV39H1O43463 412 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 RFPL1O75677 317 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 C1orf105O95561 183 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 MSL3P1P0C860 447 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 CBSLP0DN79 551 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 OGNP20774 298 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 CBSP35520 551 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 GRIA3P42263 894 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 GABRA4P48169 554 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 CTBP1Q13363 440 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 THOC5Q13769 683 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 SF1Q15637 639 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 LACTB2Q53H82 288 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 LCE2DQ5TA82 110 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 ZNF517Q6ZMY9 492 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 CILP2Q8IUL8 1156 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 DENND6AQ8IWF6 608 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 OR2L8Q8NGY9 312 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 GRK7Q8WTQ7 553 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 RAD51AP1Q96B01 352 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 LRFN5Q96NI6 719 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 MFRPQ9BY79 579 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 DDX47Q9H0S4 455 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 TLK1Q9UKI8 766 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 TCFL5Q9UL49 500 aa14.26□□□□□ -0.13
UBE2D3-228ENST00000508974 SPTA1P02549 2419 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 PCSK5Q92824 1860 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 MKRN2OSH3BPM6 223 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 ZSCAN9O15535 394 aaPredicted RBP14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 BANF1O75531 89 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 ESR1P03372 595 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 CAPN1P07384 714 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 MLNP12872 115 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 PKMP14618 531 aaKnown RBP14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 AGXTP21549 392 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 PTGIRP43119 386 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 FNTAP49354 379 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 PMS2P54278 862 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 FOXL2P58012 376 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 CUL1Q13616 776 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 TSTA3Q13630 321 aaPredicted RBP14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 ACSBG2Q5FVE4 666 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 MLIPQ5VWP3 458 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 PPIL6Q8IXY8 311 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 DNAJC22Q8N4W6 341 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 ZBTB2Q8N680 514 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 NAT8LQ8N9F0 302 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 MCUQ8NE86 351 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 FOPNLQ96NB1 174 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 TCF12Q99081 682 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 SLC30A3Q99726 388 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 MIPEPQ99797 713 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 NLNQ9BYT8 704 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 C20orf96Q9NUD7 363 aaPredicted RBP14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 TXLNGQ9NUQ3 528 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 ASIC3Q9UHC3 531 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 PLCL2Q9UPR0 1127 aa14.25□□□□□ -0.13
UBE2D3-228ENST00000508974 ZCWPW2A0A1B0GU75 182 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms