RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ABI3BPQ7Z7G0 1075 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF547Q8IVP9 402 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 LINC00469Q8N7U9 141 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 ATP8B4Q8TF62 1192 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 SLC22A17Q8WUG5 538 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 CHURC1Q8WUH1 139 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 SPDL1Q96EA4 605 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 LRIG1Q96JA1 1093 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 KLC2Q9H0B6 622 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 GBA2Q9HCG7 927 aaPredicted RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 MYOZ2Q9NPC6 264 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 C20orf96Q9NUD7 363 aaPredicted RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 THAP1Q9NVV9 213 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 EIF3KQ9UBQ5 218 aaKnown RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 ASIC3Q9UHC3 531 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 TRPS1Q9UHF7 1281 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 RSPH14Q9UHP6 348 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 CDH22Q9UJ99 828 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 C3orf18Q9UK00 162 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 CDH7Q9ULB5 785 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 A0A1B0GW15 77 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 SYCE1LA8MT33 242 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 NKRFO15226 690 aaKnown RBP eCLIP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 TBX19O60806 448 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 GLRA3O75311 464 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 GCATO75600 419 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 RSL1D1O76021 490 aaKnown RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 CBSLP0DN79 551 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 KLRC2P26717 231 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 CBSP35520 551 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 PRCPP42785 496 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 MAGEA10P43363 369 aaPredicted RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 PLTPP55058 493 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 SELENOVP59797 346 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 MYBPC1Q00872 1141 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 MBTD1Q05BQ5 628 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 E2F2Q14209 437 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 GNA13Q14344 377 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 DPYSL2Q16555 572 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 XKR3Q5GH77 459 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 C18orf63Q68DL7 685 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 DGAT2L7PQ6IED9 249 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 DCP2Q8IU60 420 aaKnown RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 TMPRSS6Q8IU80 811 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 BEND7Q8N7W2 519 aaPredicted RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 SCAIQ8N9R8 606 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 SIMC1Q8NDZ2 872 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 STKLD1Q8NE28 680 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 OR7G3Q8NG95 312 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 GPR150Q8NGU9 434 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 SHISA4Q96DD7 197 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 KLHDC7BQ96G42 594 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 PRRC1Q96M27 445 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 PPP1R10Q96QC0 940 aaKnown RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 MRPL1Q9BYD6 325 aaKnown RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF341Q9BYN7 854 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 PIGUQ9H490 435 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 PRMT8Q9NR22 394 aaPredicted RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 FBXW11Q9UKB1 542 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 KCNJ14Q9UNX9 436 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 RNF24Q9Y225 148 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 MRPS17Q9Y2R5 130 aaKnown RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 NFE2L3Q9Y4A8 694 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 TRPM7Q96QT4 1865 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GLOD5A6NK44 160 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CENPXA8MT69 81 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PDZK1P1A8MUH7 402 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 AGFG2O95081 481 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PSMG1O95456 288 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 SGPL1O95470 568 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GLP2RO95838 553 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CYP1A1P04798 512 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 FGF4P08620 206 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 EPHA1P21709 976 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ADH6P28332 368 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 MC3RP41968 323 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CDC34P49427 236 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 B4GALNT1Q00973 533 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 C17orf67Q0P5P2 114 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 BNIP3Q12983 259 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TMEM119Q4V9L6 283 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PDZK1Q5T2W1 519 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ALS2CLQ60I27 953 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 RTL6Q6ICC9 239 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ADAMTSL4Q6UY14 1074 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 LINC00696Q6ZRV3 163 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 C12orf56Q8IXR9 622 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TTC29Q8NA56 475 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 IL17RCQ8NAC3 791 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 B3GALNT2Q8NCR0 500 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 SLC2A14Q8TDB8 520 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PTP4A1Q93096 173 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 C12orf42Q96LP6 360 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ZFP42Q96MM3 310 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PRRG3Q9BZD7 231 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 FAM96AQ9H5X1 160 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 LRRC4CQ9HCJ2 640 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 NRIP3Q9NQ35 241 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 IL20Q9NYY1 176 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms