RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 LRRN4CLQ8ND94 238 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 RCBTB1Q8NDN9 531 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 OR8K5Q8NH50 307 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 EEF1AKMT1Q8WVE0 214 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SLC44A1Q8WWI5 657 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 ATL1Q8WXF7 558 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 JPH3Q8WXH2 748 aaPredicted RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 KLHL6Q8WZ60 621 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SMPDL3AQ92484 453 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 GATA6Q92908 595 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 MTBPQ96DY7 904 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 TAAR9Q96RI9 348 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SLC30A3Q99726 388 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 OLFM1Q99784 485 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 MCMBPQ9BTE3 642 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 DDA1Q9BW61 102 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SLC12A9Q9BXP2 914 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 DERL2Q9GZP9 239 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 CHRNA10Q9GZZ6 450 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 PDE7BQ9NP56 450 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SMYD2Q9NRG4 433 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SOHLH2Q9NX45 425 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SEMA5BQ9P283 1151 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 GALPQ9UBC7 116 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 PISDQ9UG56 409 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 ZNF180Q9UJW8 692 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 TLK1Q9UKI8 766 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 NOVA2Q9UNW9 492 aaKnown RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 PCDHGA7Q9Y5G6 932 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 NFS1Q9Y697 457 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 CEP295Q9C0D2 2601 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 A0A087X1B8 175 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 A0A0J9YY10 115 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 EFCAB7A8K855 629 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 A8MU76 341 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 ARHGEF33A8MVX0 844 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 POLR1CO15160 346 aaPredicted RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 NVLO15381 856 aaKnown RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 BRINP1O60477 761 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 TNFSF15O95150 251 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 SYF2O95926 243 aaKnown RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 C1QAP02745 245 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 MSL3P1P0C860 447 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 ERGP11308 486 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 MPSTP25325 297 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 PRDX3P30048 256 aaKnown RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 RPA3P35244 121 aaPredicted RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 HNMTP50135 292 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 SERPINB8P50452 374 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 KPNA2P52292 529 aaKnown RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 PNLIPRP1P54315 467 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 TAS2R39P59534 338 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 MC2RQ01718 297 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 C16orf72Q14CZ0 275 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 ZKSCAN8Q15776 578 aaPredicted RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 FAM83EQ2M2I3 478 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 TBC1D25Q3MII6 688 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 KLC3Q6P597 504 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 FBXO38Q6PIJ6 1188 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 TMPRSS9Q7Z410 1059 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 SYTL1Q8IYJ3 562 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 UBLCP1Q8WVY7 318 aaPredicted RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 N4BP2L2Q92802 583 aaPredicted RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 TCTN2Q96GX1 697 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 SLC41A2Q96JW4 573 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 TSNARE1Q96NA8 513 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 SLC46A1Q96NT5 459 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 FCRL4Q96PJ5 515 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 PAFAH2Q99487 392 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 MAP3K3Q99759 626 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 PITPNM3Q9BZ71 974 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 XKR8Q9H6D3 395 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 ANKZF1Q9H8Y5 726 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 FBXO8Q9NRD0 319 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 ARL15Q9NXU5 204 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 SLC39A1Q9NY26 324 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 TMEM9Q9P0T7 183 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 CTNNAL1Q9UBT7 734 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 PLAGL1Q9UM63 463 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 RUVBL2Q9Y230 463 aaKnown RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 BTRCQ9Y297 605 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 MTO1Q9Y2Z2 717 aaKnown RBP8.84□□□□□ -0.99
NUP54-207ENST00000508583 PCDHGA3Q9Y5H0 932 aa8.84□□□□□ -0.99
NUP54-207ENST00000508583 IGHV5-51A0A0C4DH38 117 aa8.83□□□□□ -1
NUP54-207ENST00000508583 IQANK1A0A1B0GTG1 560 aa8.83□□□□□ -1
NUP54-207ENST00000508583 SYCE1LA8MT33 242 aa8.83□□□□□ -1
NUP54-207ENST00000508583 CDRT15L2A8MXV6 281 aa8.83□□□□□ -1
NUP54-207ENST00000508583 POC1B-GALNT4F8VUJ3 575 aa8.83□□□□□ -1
NUP54-207ENST00000508583 BTN3A3O00478 584 aa8.83□□□□□ -1
NUP54-207ENST00000508583 RRP8O43159 456 aaKnown RBP8.83□□□□□ -1
NUP54-207ENST00000508583 PIAS1O75925 651 aa8.83□□□□□ -1
NUP54-207ENST00000508583 TSPAN12O95859 305 aa8.83□□□□□ -1
NUP54-207ENST00000508583 SLC16A8O95907 504 aa8.83□□□□□ -1
NUP54-207ENST00000508583 UGT2B7P16662 529 aa8.83□□□□□ -1
NUP54-207ENST00000508583 HRH2P25021 359 aa8.83□□□□□ -1
NUP54-207ENST00000508583 TYK2P29597 1187 aa8.83□□□□□ -1
NUP54-207ENST00000508583 OAS2P29728 719 aaKnown RBP8.83□□□□□ -1
NUP54-207ENST00000508583 CMPK1P30085 196 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms