RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 C2orf42Q9NWW7 574 aa4.62□□□□□ -1.67
GYPA-205ENST00000508337 C19orf25Q9UFG5 118 aaPredicted RBP4.62□□□□□ -1.67
GYPA-205ENST00000508337 MTUS1Q9ULD2 1270 aa4.62□□□□□ -1.67
GYPA-205ENST00000508337 SMCHD1A6NHR9 2005 aa4.62□□□□□ -1.67
GYPA-205ENST00000508337 IGKV3D-15A0A087WSY6 115 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 A0A087WW49 117 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 ERAL1O75616 437 aaKnown RBP4.61□□□□□ -1.67
GYPA-205ENST00000508337 FAM157CP0CG43 387 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 HSPA8P11142 646 aaKnown RBP4.61□□□□□ -1.67
GYPA-205ENST00000508337 AKR1B1P15121 316 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 SNTB1Q13884 538 aaKnown RBP4.61□□□□□ -1.67
GYPA-205ENST00000508337 TUBB2AQ13885 445 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 IL11RAQ14626 422 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 CYP4A22Q5TCH4 519 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 C20orf194Q5TEA3 1177 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 NAA16Q6N069 864 aaPredicted RBP4.61□□□□□ -1.67
GYPA-205ENST00000508337 PWWP2BQ6NUJ5 590 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 MFSD12Q6NUT3 480 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 SNX32Q86XE0 403 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 ZNF843Q8N446 348 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 TC2NQ8N9U0 490 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 NPEPL1Q8NDH3 523 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 GPRC5AQ8NFJ5 357 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 PHLDA1Q8WV24 401 aaPredicted RBP4.61□□□□□ -1.67
GYPA-205ENST00000508337 TMEM190Q8WZ59 177 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 TUBB2BQ9BVA1 445 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 FAM49AQ9H0Q0 323 aaPredicted RBP4.61□□□□□ -1.67
GYPA-205ENST00000508337 ARRDC1-AS1Q9H2J1 176 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 ANKZF1Q9H8Y5 726 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 INTS9Q9NV88 658 aaKnown RBP4.61□□□□□ -1.67
GYPA-205ENST00000508337 HAO2Q9NYQ3 351 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 GDE1Q9NZC3 331 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 GRID1Q9ULK0 1009 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 TNNQ9UQP3 1299 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 ZNF541Q9H0D2 1346 aa4.61□□□□□ -1.67
GYPA-205ENST00000508337 EDDM13A0A1B0GTR0 161 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 EPHB6O15197 1021 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 ARHGEF9O43307 516 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 WDPCPO95876 746 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 FAM200BP0CF97 657 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 LBX1P52954 281 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 IFI35P80217 286 aaPredicted RBP4.6□□□□□ -1.67
GYPA-205ENST00000508337 SP3Q02447 781 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 RALGDSQ12967 914 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 BECN1Q14457 450 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 PHLDA2Q53GA4 152 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 STXBP4Q6ZWJ1 553 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 CENPVQ7Z7K6 275 aaPredicted RBP4.6□□□□□ -1.67
GYPA-205ENST00000508337 RTN4RL2Q86UN3 420 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 ZNF595Q8IYB9 648 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 EID3Q8N140 333 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 NDUFAF2Q8N183 169 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 DBF4BQ8NFT6 615 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 OR11H4Q8NGC9 324 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 OR2T6Q8NHC8 308 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 FGFBP3Q8TAT2 258 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 ARHGAP45Q92619 1136 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 MOB3AQ96BX8 217 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 DHX58Q96C10 678 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 GMPPAQ96IJ6 420 aaPredicted RBP4.6□□□□□ -1.67
GYPA-205ENST00000508337 AP1M1Q9BXS5 423 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 NOL11Q9H8H0 719 aaKnown RBP4.6□□□□□ -1.67
GYPA-205ENST00000508337 SH3GLB2Q9NR46 395 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 SDR39U1Q9NRG7 319 aaPredicted RBP4.6□□□□□ -1.67
GYPA-205ENST00000508337 ATAD3AQ9NVI7 634 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 P4HTMQ9NXG6 502 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 KLHL8Q9P2G9 620 aaPredicted RBP4.6□□□□□ -1.67
GYPA-205ENST00000508337 CRNNQ9UBG3 495 aaPredicted RBP4.6□□□□□ -1.67
GYPA-205ENST00000508337 EPHA6Q9UF33 1036 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 PASKQ96RG2 1323 aa4.6□□□□□ -1.67
GYPA-205ENST00000508337 TCRBV21S2A2A0A5A6 115 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 MEIOCA2RUB1 952 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 PGM3O95394 542 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 MYBL1P10243 752 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 NR2F1P10589 423 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 HAPLN1P10915 354 aaPredicted RBP4.59□□□□□ -1.67
GYPA-205ENST00000508337 SLC6A12P48065 614 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 CCR3P51677 355 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 BMXP51813 675 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 MAPK12P53778 367 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 ALCAMQ13740 583 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 P2RY6Q15077 328 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 TEAD2Q15562 447 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 PHKG1Q16816 387 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 ITPRIPL2Q3MIP1 535 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 LCN1P1Q5VSP4 162 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 ZBTB49Q6ZSB9 765 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 Q6ZSR9 355 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 ANKRD23Q86SG2 305 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 NUDT13Q86X67 352 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 LSMEM2Q8N112 164 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 RYBPQ8N488 228 aaPredicted RBP4.59□□□□□ -1.67
GYPA-205ENST00000508337 SLC4A11Q8NBS3 891 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 ZNF830Q96NB3 372 aaPredicted RBP4.59□□□□□ -1.67
GYPA-205ENST00000508337 CNOT10Q9H9A5 744 aaKnown RBP4.59□□□□□ -1.67
GYPA-205ENST00000508337 CHST11Q9NPF2 352 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 CACNG5Q9UF02 275 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 ANAPC2Q9UJX6 822 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 ABT1Q9ULW3 272 aaKnown RBP4.59□□□□□ -1.67
GYPA-205ENST00000508337 STUB1Q9UNE7 303 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms