RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FBXO15Q8NCQ5 510 aaPredicted RBP19.19■□□□□ 0.66
SFXN1-209ENST00000508290 FLVCR1-AS1Q8TAF5 88 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 INPP5DQ92835 1189 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 C17orf62Q9BQA9 187 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 ARHGAP9Q9BRR9 750 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 IARS2Q9NSE4 1012 aaKnown RBP19.19■□□□□ 0.66
SFXN1-209ENST00000508290 SPHK1Q9NYA1 384 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 DHRS7Q9Y394 339 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 TEX264Q9Y6I9 313 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 TMEM150CB9EJG8 249 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 E7EQ34 232 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 PSIP1O75475 530 aaKnown RBP19.18■□□□□ 0.66
SFXN1-209ENST00000508290 TIAF1O95411 115 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 MPC1LP0DKB6 136 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 WT1P19544 449 aaPredicted RBP19.18■□□□□ 0.66
SFXN1-209ENST00000508290 KLHL38Q2WGJ6 581 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 MSS51Q4VC12 460 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 ZNF789Q5FWF6 425 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 DENND1AQ8TEH3 1009 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 STARD8Q92502 1023 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 BBC3Q96PG8 261 aaPredicted RBP19.18■□□□□ 0.66
SFXN1-209ENST00000508290 ERP44Q9BS26 406 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 TRIM51Q9BSJ1 452 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 AARSD1Q9BTE6 412 aaKnown RBP19.18■□□□□ 0.66
SFXN1-209ENST00000508290 TAS2R13Q9NYV9 303 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 WHRNQ9P202 907 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 CROTQ9UKG9 612 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 PLAGL1Q9UM63 463 aa19.18■□□□□ 0.66
SFXN1-209ENST00000508290 TARM1B6A8C7 271 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 TERTO14746 1132 aaKnown RBP19.17■□□□□ 0.66
SFXN1-209ENST00000508290 PVRP15151 417 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 TCN2P20062 427 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 OAS2P29728 719 aaKnown RBP19.17■□□□□ 0.66
SFXN1-209ENST00000508290 ELK3P41970 407 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 RGS4P49798 205 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 RPS15P62841 145 aaKnown RBP19.17■□□□□ 0.66
SFXN1-209ENST00000508290 CKAP4Q07065 602 aaKnown RBP19.17■□□□□ 0.66
SFXN1-209ENST00000508290 DNASE1L3Q13609 305 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 CYP2A13Q16696 494 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 ACSBG2Q5FVE4 666 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 ZC3H12BQ5HYM0 836 aaKnown RBP19.17■□□□□ 0.66
SFXN1-209ENST00000508290 STEAP4Q687X5 459 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 BORAQ6PGQ7 559 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 SYT10Q6XYQ8 523 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 ZNF517Q6ZMY9 492 aaPredicted RBP19.17■□□□□ 0.66
SFXN1-209ENST00000508290 CDHR3Q6ZTQ4 885 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 UNC5BQ8IZJ1 945 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 OR9A1PQ8NGU1 263 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 ZUFSPQ96AP4 578 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 MED8Q96G25 268 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 SLC7A5P2Q9GIP4 190 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 ACTR5Q9H9F9 607 aaPredicted RBP19.17■□□□□ 0.66
SFXN1-209ENST00000508290 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.17■□□□□ 0.66
SFXN1-209ENST00000508290 SRPK3Q9UPE1 567 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 PLCL2Q9UPR0 1127 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 KLK4Q9Y5K2 254 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 NFS1Q9Y697 457 aa19.17■□□□□ 0.66
SFXN1-209ENST00000508290 E7ESA3 106 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 MYO1CO00159 1063 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 HAUS5O94927 633 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 TUBB4AP04350 444 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 NTRK1P04629 796 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 ERVK-10P10266 1014 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 ERGP11308 486 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 PEBP1P30086 187 aaKnown RBP19.16■□□□□ 0.66
SFXN1-209ENST00000508290 MPP1Q00013 466 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 CDC20Q12834 499 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 SF1Q15637 639 aaKnown RBP19.16■□□□□ 0.66
SFXN1-209ENST00000508290 ZNF549Q6P9A3 640 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 TLDC1Q6P9B6 456 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 PCSK4Q6UW60 755 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 ZNF572Q7Z3I7 529 aaPredicted RBP19.16■□□□□ 0.66
SFXN1-209ENST00000508290 LMNTD1Q8N9Z9 388 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 OR1L3Q8NH93 324 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 FAM136AQ96C01 138 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 CLIP3Q96DZ5 547 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 TRIM31Q9BZY9 425 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 PHACTR1Q9C0D0 580 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 RAB17Q9H0T7 212 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 ADNPQ9H2P0 1102 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 PPANQ9NQ55 473 aaKnown RBP19.16■□□□□ 0.66
SFXN1-209ENST00000508290 TRMT6Q9UJA5 497 aaKnown RBP19.16■□□□□ 0.66
SFXN1-209ENST00000508290 CHMP2BQ9UQN3 213 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 MED16Q9Y2X0 877 aa19.16■□□□□ 0.66
SFXN1-209ENST00000508290 MEN1O00255 615 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 EIF3HO15372 352 aaKnown RBP eCLIP19.15■□□□□ 0.66
SFXN1-209ENST00000508290 ZBTB14O43829 449 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 OR2B3O76000 313 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 CD63P08962 238 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 BDKRB1P46663 353 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 RPL21P46778 160 aaKnown RBP19.15■□□□□ 0.66
SFXN1-209ENST00000508290 CAV1Q03135 178 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 TRIM73Q86UV7 250 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 CD200R1Q8TD46 325 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 CT55Q8WUE5 264 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 ASB11Q8WXH4 323 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 SMPDL3AQ92484 453 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 GPR21Q99679 349 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 NRTNQ99748 197 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 ENAMQ9NRM1 1142 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms