RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 OR4A15Q8NGL6 344 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 GLYATL2Q8WU03 294 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 SNX33Q8WV41 574 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 LPPQ93052 612 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 NUDT11Q96G61 164 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 SIGLEC11Q96RL6 698 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 NLNQ9BYT8 704 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 ANKRD60Q9BZ19 345 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 OR51V1Q9H2C8 321 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 ANKZF1Q9H8Y5 726 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 VAT1LQ9HCJ6 419 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 TIMMDC1Q9NPL8 285 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 YAE1D1Q9NRH1 226 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 MTCH1Q9NZJ7 389 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 PEMTQ9UBM1 199 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 NFU1Q9UMS0 254 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 ERVK-7P63135 1459 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 LMTK2Q8IWU2 1503 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 MAGEB2O15479 319 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CHMP2AO43633 222 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 RAD17O75943 681 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 H2AFB2P0C5Z0 115 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 TNNI3P19429 210 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CD80P33681 288 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 HMGCLP35914 325 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CHRNA4P43681 627 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 SERPINB9P50453 376 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CDH13P55290 713 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 NRG3P56975 720 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 UBE2G2P60604 165 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 RESTQ13127 1097 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 MADCAM1Q13477 382 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 PPRC1Q5VV67 1664 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 STEAP3Q658P3 488 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM211Q6ICI0 200 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 KIAA1324Q6UXG2 1013 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 DLEU7Q6UYE1 221 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM26Q6ZUK4 368 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 C9orf43Q8TAL5 461 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 SPSB1Q96BD6 273 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM168Q9H0V1 697 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 GAL3ST2Q9H3Q3 398 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 SLCO1C1Q9NYB5 712 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 VSX1Q9NZR4 365 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 ARPP21Q9UBL0 812 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 NRXN1Q9ULB1 1477 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 SNX7Q9UNH6 387 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 STARD13Q9Y3M8 1113 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 KIDINS220Q9ULH0 1771 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF518AQ6AHZ1 1483 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 C7orf72A4D263 438 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 NFIBO00712 420 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 AHSA1O95433 338 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 APOEP02649 317 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM157BP0CG42 384 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 TGM2P21980 687 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 OXTRP30559 389 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 NAMPTP43490 491 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 RGS4P49798 205 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 NCKAP1LP55160 1127 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 SHC2P98077 582 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 MFSD13AQ14CX5 517 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 LBHQ53QV2 105 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF470Q6ECI4 717 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 RTL4Q6ZR62 310 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 TECPR1Q7Z6L1 1165 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 LUZP2Q86TE4 346 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 GLB1L2Q8IW92 636 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 AQP12AQ8IXF9 295 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM58AQ8N1B3 248 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 SVOPQ8N4V2 548 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 CEP112Q8N8E3 955 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM47BQ8NA70 645 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 KBTBD3Q8NAB2 608 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 DTX3LQ8TDB6 740 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 ARRDC3Q96B67 414 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 PBKQ96KB5 322 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 FOXN4Q96NZ1 517 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM246Q9BRR3 403 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 ATG10Q9H0Y0 220 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 MRPL22Q9NWU5 206 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 ELOVL2Q9NXB9 296 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 SIDT1Q9NXL6 827 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 RDH8Q9NYR8 311 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 RBAKQ9NYW8 714 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 PISDQ9UG56 409 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 ADAM28Q9UKQ2 775 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 WBP11Q9Y2W2 641 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM184BQ9Y519 407 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 TSPOAP1O95153 1857 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 MYO3AQ8NEV4 1616 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 UGGT1Q9NYU2 1555 aa7.3□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM240BA0A1B0GVZ2 78 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 LNP1A1A4G5 178 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 MAGEA13PA6NCF6 341 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM177BA6PVY3 158 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF785A8K8V0 405 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 A8MXQ7 604 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms