RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 FGF3P11487 239 aaPredicted RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 ARSBP15848 533 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 TCEA1P23193 301 aaKnown RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CYP3A7P24462 503 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PTPN3P26045 913 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 AVPR2P30518 371 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 ADSSP30520 456 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CCR3P51677 355 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 STX1BP61266 288 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 NPRL3Q12980 569 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PDIA5Q14554 519 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 IL11RAQ14626 422 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 NONOQ15233 471 aaKnown RBP eCLIP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 MYLK3Q32MK0 819 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CEP55Q53EZ4 464 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 KRT79Q5XKE5 535 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 ETFRF1Q6IPR1 90 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 C18orf65Q6ZTR6 163 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PLEKHM3Q6ZWE6 761 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 APTXQ7Z2E3 356 aaKnown RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 RNF144BQ7Z419 303 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 ADCK2Q7Z695 626 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 FJX1Q86VR8 437 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 HOOK3Q86VS8 718 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 FOXP4Q8IVH2 680 aaPredicted RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PRR26Q8N8Z3 221 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CNBD1Q8NA66 436 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 GMCL1P1Q8NEA9 526 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 OR8K1Q8NGG5 319 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 FAM110DQ8TAY7 271 aaPredicted RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 SNED1Q8TER0 1413 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CTNNBL1Q8WYA6 563 aaPredicted RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 HDAC11Q96DB2 347 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 APOLD1Q96LR9 279 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 NAPGQ99747 312 aaPredicted RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CLSTN3Q9BQT9 956 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 SLC5A7Q9GZV3 580 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 TSPYL1Q9H0U9 437 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 HIPK3Q9H422 1215 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 VIPAS39Q9H9C1 493 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 ACTR5Q9H9F9 607 aaPredicted RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 TXNRD2Q9NNW7 524 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 MED4Q9NPJ6 270 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 TLR8Q9NR97 1041 aaKnown RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 POLE3Q9NRF9 147 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 TXLNGQ9NUQ3 528 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 THAP1Q9NVV9 213 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 WNT16Q9UBV4 365 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CPSF3Q9UKF6 684 aaKnown RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 NENFQ9UMX5 172 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PCDHGB1Q9Y5G3 927 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CLDN16Q9Y5I7 305 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CAPN7Q9Y6W3 813 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 COL4A1P02462 1669 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 FAM205AQ6ZU69 1335 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 PSME4Q14997 1843 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 GPR75-ASB3A0A0A6YYF3 556 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 CTAGE15A4D2H0 777 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 GAGE12JA6NER3 117 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 A6NL46 340 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 FAM25EA8MYX2 175 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 EIF3CLB5ME19 914 aaKnown RBP4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 RGS14O43566 566 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 TSC22D2O75157 780 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 GYPCP04921 128 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 CTAGE8P0CG41 777 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 PRLRP16471 622 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 FERP16591 822 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 CHRNB2P17787 502 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 CCNA2P20248 432 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 CCNE1P24864 410 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 ANXA13P27216 316 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 PBLDP30039 288 aaPredicted RBP4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 HOXD3P31249 432 aaPredicted RBP4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 HNRNPH3P31942 346 aaKnown RBP4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 RFC4P35249 363 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 HNF1BP35680 557 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 IFNAR2P48551 515 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 RAB28P51157 221 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 CLCN5P51795 746 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 ARFIP1P53367 373 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 MVDP53602 400 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 OAZ1P54368 228 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 NAPAP54920 295 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 DSCR9P59020 149 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 CBX1P83916 185 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 TFAP4Q01664 338 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 EGR4Q05215 589 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 CRYZQ08257 329 aaKnown RBP4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 RALGDSQ12967 914 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 FRG1Q14331 258 aaKnown RBP4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 KRT31Q15323 416 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 SPA17Q15506 151 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 SLC39A12Q504Y0 691 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 HSP90B2PQ58FF3 399 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 ASPHD1Q5U4P2 390 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 TBC1D9BQ66K14 1250 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 KIAA0930Q6ICG6 404 aaPredicted RBP4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 MOXD1Q6UVY6 613 aa4.24□□□□□ -1.73
CALCOCO2-208ENST00000506971 MEX3BQ6ZN04 569 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms