RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MYO1HQ8N1T3 1032 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 C19orf47Q8N9M1 422 aaKnown RBP16.13■□□□□ 0.17
SNCA-209ENST00000506244 NOA1Q8NC60 698 aaKnown RBP16.13■□□□□ 0.17
SNCA-209ENST00000506244 HNRNPLLQ8WVV9 542 aaKnown RBP16.13■□□□□ 0.17
SNCA-209ENST00000506244 OR2A14Q96R47 310 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 SLC30A3Q99726 388 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 MENTQ9BUN1 341 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 TWSG1Q9GZX9 223 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 WDR70Q9NW82 654 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 TMEM184BQ9Y519 407 aaPredicted RBP16.13■□□□□ 0.17
SNCA-209ENST00000506244 CELSR3Q9NYQ7 3312 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 TCRBV9S1A1TA0A576 114 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 PABPN1LA6NDY0 278 aaKnown RBP16.12■□□□□ 0.17
SNCA-209ENST00000506244 ARHGEF33A8MVX0 844 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 MYO1CO00159 1063 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ZBTB14O43829 449 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 C8GP07360 202 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 FOLR1P15328 257 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ST6GAL1P15907 406 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 CYP2A7P20853 494 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 FDXRP22570 491 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 MCM3P25205 808 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ITPKBP27987 946 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 SSTR1P30872 391 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 MAGEA4P43358 317 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 CDKN2DP55273 166 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 KCNAB1Q14722 419 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ARHGAP19Q14CB8 494 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 HECTD2Q5U5R9 776 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ZC3HC1Q86WB0 502 aaKnown RBP16.12■□□□□ 0.17
SNCA-209ENST00000506244 NLGN4XQ8N0W4 816 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ESX1Q8N693 406 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 IL22RA1Q8N6P7 574 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 LINC01555Q8NAE3 123 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 NLGN4YQ8NFZ3 816 aaPredicted RBP16.12■□□□□ 0.17
SNCA-209ENST00000506244 OR9A1PQ8NGU1 263 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ASB11Q8WXH4 323 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 N4BP2L2Q92802 583 aaPredicted RBP16.12■□□□□ 0.17
SNCA-209ENST00000506244 TCTN2Q96GX1 697 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 VPS39Q96JC1 886 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ELMO2Q96JJ3 720 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 TRAPPC9Q96Q05 1148 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 CCNL2Q96S94 520 aaPredicted RBP16.12■□□□□ 0.17
SNCA-209ENST00000506244 NRTNQ99748 197 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 CHRNA10Q9GZZ6 450 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 RHOJQ9H4E5 214 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 ZDHHC18Q9NUE0 388 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 SPHK1Q9NYA1 384 aa16.12■□□□□ 0.17
SNCA-209ENST00000506244 SDK2Q58EX2 2172 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 RAD1O60671 282 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 DLGAP3O95886 979 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 MT-ND3P03897 115 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 OAS2P29728 719 aaKnown RBP16.11■□□□□ 0.17
SNCA-209ENST00000506244 IL2P60568 153 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 NAB1Q13506 487 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 TRADDQ15628 312 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 CYP2A13Q16696 494 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 COL28A1Q2UY09 1125 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.11■□□□□ 0.17
SNCA-209ENST00000506244 C3orf62Q6ZUJ4 267 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 UBE2R2Q712K3 238 aaPredicted RBP16.11■□□□□ 0.17
SNCA-209ENST00000506244 TRIM73Q86UV7 250 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 TAX1BP1Q86VP1 789 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 CACNA2D3Q8IZS8 1091 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 KIAA1143Q96AT1 154 aaPredicted RBP16.11■□□□□ 0.17
SNCA-209ENST00000506244 PPM1MQ96MI6 270 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 IL17FQ96PD4 163 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 CPNE1Q99829 537 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.11■□□□□ 0.17
SNCA-209ENST00000506244 CIDEBQ9UHD4 219 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 PILRAQ9UKJ1 303 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 SSUH2Q9Y2M2 353 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 VWA7Q9Y334 891 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 PSAT1Q9Y617 370 aa16.11■□□□□ 0.17
SNCA-209ENST00000506244 FAM95CA0A1B0GW59 222 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 FAM159BA6NKW6 160 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 GFYI3L273 518 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 SLC16A5O15375 505 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 CPNE3O75131 537 aaKnown RBP16.1■□□□□ 0.17
SNCA-209ENST00000506244 KIAA0754O94854 1291 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 ERGP11308 486 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 PVRP15151 417 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 PEBP1P30086 187 aaKnown RBP16.1■□□□□ 0.17
SNCA-209ENST00000506244 PHBP35232 272 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 SLC12A2P55011 1212 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 GPR19Q15760 415 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 FBXO38Q6PIJ6 1188 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 C19orf48Q6RUI8 117 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 PAQR3Q6TCH7 311 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 CCDC81Q6ZN84 652 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 PIWIL4Q7Z3Z4 852 aaKnown RBP16.1■□□□□ 0.17
SNCA-209ENST00000506244 TMEM126BQ8IUX1 230 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 FLVCR1-AS1Q8TAF5 88 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 MCOLN3Q8TDD5 553 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 SMPDL3AQ92484 453 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 ZNF501Q96CX3 271 aaPredicted RBP16.1■□□□□ 0.17
SNCA-209ENST00000506244 LINGO1Q96FE5 620 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 TSPAN17Q96FV3 270 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 FMO2Q99518 471 aa16.1■□□□□ 0.17
SNCA-209ENST00000506244 EFHD1Q9BUP0 239 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms