RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 GDPD4Q6W3E5 623 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF771Q7L3S4 317 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 DET1Q7L5Y6 550 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CATSPER4Q7RTX7 472 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 TMPRSS11BQ86T26 416 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 MFN1Q8IWA4 741 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CFAP206Q8IYR0 622 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CIARTQ8N365 385 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CARNMT1Q8N4J0 409 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 TMCO5AQ8N6Q1 288 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 PPFIBP2Q8ND30 876 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 GOT1L1Q8NHS2 421 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 KIF18AQ8NI77 898 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF473Q8WTR7 871 aaKnown RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 ATL1Q8WXF7 558 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 SYN2Q92777 582 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 SNX21Q969T3 373 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 SIPA1Q96FS4 1042 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 ST6GAL2Q96JF0 529 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 SGK494Q96LW2 274 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 FER1L6-AS2Q96M78 137 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF558Q96NG5 402 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 GBP5Q96PP8 586 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC25A23Q9BV35 468 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 TRMT61BQ9BVS5 477 aaKnown RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 VN1R1Q9GZP7 353 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 TSPY26PQ9H489 355 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 MYNNQ9NPC7 610 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 PFDN4Q9NQP4 134 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 TAAR2Q9P1P5 351 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 B3GAT1Q9P2W7 334 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CPSF3Q9UKF6 684 aaKnown RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 RNF150Q9ULK6 438 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 PA2G4Q9UQ80 394 aaKnown RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 A0A1W2PPQ1 181 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 A0A1W2PRB8 838 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ANTXRLA6NF34 631 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 OR6C76A6NM76 312 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 E9PI62 339 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 BMPR1BO00238 502 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 GAPDHSO14556 408 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC7A4O43246 635 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 RECQL5O94762 991 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 GOSR1O95249 250 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 WDPCPO95876 746 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PENKP01210 267 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 IGHV2-70P01814 119 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ATP5BP06576 529 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 RAB40ALP0C0E4 278 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SMIM18P0DKX4 95 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 KRT5P13647 590 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 P4HA1P13674 534 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 CYP11B2P19099 503 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 EEF1B2P24534 225 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PTAFRP25105 342 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 MPZP25189 248 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 MARK3P27448 753 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC6A6P31641 620 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 HSPA4P34932 840 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ALDH3A2P51648 485 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 MAPK12P53778 367 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 CDH11P55287 796 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 CX3CL1P78423 397 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ARL16Q0P5N6 197 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PPIGQ13427 754 aaKnown RBP eCLIP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 FCN2Q15485 313 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PKN2Q16513 984 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 HYAL4Q2M3T9 481 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ACCSLQ4AC99 568 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 DNAJC21Q5F1R6 531 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 MFSD12Q6NUT3 480 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 CNSTQ6PJW8 725 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PET117Q6UWS5 81 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 LINGO4Q6UY18 593 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 MEX3BQ6ZN04 569 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ANO5Q75V66 913 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ERN2Q76MJ5 926 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ADCK2Q7Z695 626 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 NFE4Q86UQ8 179 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PLD3Q8IV08 490 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 CCDC170Q8IYT3 715 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 TRIML1Q8N9V2 468 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SPC24Q8NBT2 197 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 OR2T12Q8NG77 320 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 OR13J1Q8NGT2 312 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 FGFBP3Q8TAT2 258 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 GDAP1Q8TB36 358 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SSMEM1Q8WWF3 244 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ROBO4Q8WZ75 1007 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SPSB1Q96BD6 273 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ALG14Q96F25 216 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SCRN2Q96FV2 425 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PKNOX2Q96KN3 472 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 CCDC43Q96MW1 224 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 RAB3IPQ96QF0 476 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 MYADMQ96S97 322 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 FEVQ99581 238 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PSD2Q9BQI7 771 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 RTP3Q9BQQ7 232 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms