RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 GLIS1Q8NBF1 620 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 CLEC18CQ8NCF0 446 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 SLC35B2Q8TB61 432 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 SKA2Q8WVK7 121 aaPredicted RBP10.34□□□□□ -0.75
SNCA-207ENST00000502987 AP1M1Q9BXS5 423 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 ETNK1Q9HBU6 452 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 CASS4Q9NQ75 786 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 PRDM9Q9NQV7 894 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 RAB6BQ9NRW1 208 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 SLC2A6Q9UGQ3 507 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 CIDEBQ9UHD4 219 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 SRPK3Q9UPE1 567 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 PLCL2Q9UPR0 1127 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 KLHL20Q9Y2M5 609 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 MAP4K5Q9Y4K4 846 aa10.34□□□□□ -0.75
SNCA-207ENST00000502987 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
SNCA-207ENST00000502987 HCRTR1O43613 425 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 KLHL41O60662 606 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 CEACAM4O75871 244 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 ALPPP05187 535 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 APOA4P06727 396 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 APRTP07741 180 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 ETS1P14921 441 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 VARSP26640 1264 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 KIR2DS3Q14952 304 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 SF1Q15637 639 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 ZIC1Q15915 447 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 CYP2A13Q16696 494 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 SLC5A12Q1EHB4 618 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 EIF2S3LQ2VIR3 472 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 DNAJC21Q5F1R6 531 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 SLC6A19Q695T7 634 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 PTRHD1Q6GMV3 140 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 TREML4Q6UXN2 200 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 NLRP9Q7RTR0 991 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 MRGPREQ86SM8 312 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 OTUD6BQ8N6M0 293 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 RBMXL3Q8N7X1 1067 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 CCDC89Q8N998 374 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 LMNTD1Q8N9Z9 388 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 SPC24Q8NBT2 197 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 PPHLN1Q8NEY8 458 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 PROKR1Q8TCW9 393 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 C1orf54Q8WWF1 131 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 ASZ1Q8WWH4 475 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 DLG3Q92796 817 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 PNPLA2Q96AD5 504 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 PTERQ96BW5 349 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 PSMG3-AS1Q96PY0 264 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 INTS7Q9NVH2 962 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 SLC39A10Q9ULF5 831 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 FER1L5A0AVI2 2057 aa10.33□□□□□ -0.76
SNCA-207ENST00000502987 MDC1Q14676 2089 aaKnown RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 USP9XQ93008 2570 aaPredicted RBP10.33□□□□□ -0.76
SNCA-207ENST00000502987 SHANK1Q9Y566 2161 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 A0A0U1RQJ8 604 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 IQCF5A8MTL0 148 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 LIASO43766 372 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 KLF7O75840 302 aaPredicted RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 SORBS2O94875 1100 aaKnown RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 CTSBP07858 339 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 TPBGLP0DKB5 382 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 PIM1P11309 404 aaPredicted RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 MAGP20916 626 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 CCR7P32248 378 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 GRIA1P42261 906 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 GRIA3P42263 894 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 RAB28P51157 221 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 TMED2Q15363 201 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 PLEKHN1Q494U1 663 aaPredicted RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 NKAIN1Q4KMZ8 207 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 PRR30Q53SZ7 412 aaPredicted RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 AARS2Q5JTZ9 985 aaKnown RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 VWA5B1Q5TIE3 1220 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 ZNF385CQ66K41 422 aaPredicted RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 TTLL10Q6ZVT0 673 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 PRUNE1Q86TP1 453 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 LDB1Q86U70 411 aaPredicted RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 MCATQ8IVS2 390 aaKnown RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 SLC22A15Q8IZD6 547 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 KRT222Q8N1A0 295 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 GALNT16Q8N428 558 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 DNAJC22Q8N4W6 341 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 OR13J1Q8NGT2 312 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 OR2Y1Q8NGV0 311 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 SSC4DQ8WTU2 575 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 SLC22A18Q96BI1 424 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 HES6Q96HZ4 224 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 ZNF778Q96MU6 729 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 GBP5Q96PP8 586 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 RANBP9Q96S59 729 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 SMAD5Q99717 465 aaKnown RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 CARD6Q9BX69 1037 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 FRMD8P1Q9BZ68 369 aaPredicted RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 ILKAPQ9H0C8 392 aaPredicted RBP10.32□□□□□ -0.76
SNCA-207ENST00000502987 ATP13A2Q9NQ11 1180 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 CATSPERZQ9NTU4 200 aa10.32□□□□□ -0.76
SNCA-207ENST00000502987 P4HTMQ9NXG6 502 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms