RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CREB5Q02930 508 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 CNTN1Q12860 1018 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SLC17A1Q14916 467 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 OVOS1Q6IE37 1185 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 CXorf57Q6NSI4 855 aaKnown RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 AATKQ6ZMQ8 1374 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 TRMT11Q7Z4G4 463 aaKnown RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ARHGAP12Q8IWW6 846 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ZNF548Q8NEK5 533 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 POTEKPQ9BYX7 375 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 CHST10O43529 356 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 XYLBO75191 536 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SLC9B2Q86UD5 537 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 OSTM1Q86WC4 334 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 UBAC2Q8NBM4 344 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 C9orf43Q8TAL5 461 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 TINAGL1Q9GZM7 467 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 OR51E2Q9H255 320 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 GPATCH2Q9NW75 528 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 GSKIPQ9P0R6 139 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 LOC100130705A0A1B0GUX0 176 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 CASRP41180 1078 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 TOB1P50616 345 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SMARCD1Q96GM5 515 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 C11orf16Q9NQ32 467 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 XPNPEP3Q9NQH7 507 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ATG4BQ9Y4P1 393 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 MAGEB2O15479 319 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ATP6AP2O75787 350 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 VASPP50552 380 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SP140Q13342 867 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 FSCN1Q16658 493 aaKnown RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 STXBP5Q5T5C0 1151 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 KIAA0930Q6ICG6 404 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 TMEM270Q6UE05 265 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 WASH2PQ6VEQ5 465 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 LRRTM3Q86VH5 581 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 CMTM3Q96MX0 182 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 COL20A1Q9P218 1284 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 RAP2CQ9Y3L5 183 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 TIMM22Q9Y584 194 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 PCDHA11Q9Y5I1 949 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 PRKACGP22612 351 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 LIFRP42702 1097 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 VPS26BQ4G0F5 336 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 DALRD3Q5D0E6 543 aaKnown RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 C6orf141Q5SZD1 244 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ANKK1Q8NFD2 765 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 OR13J1Q8NGT2 312 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 NDNFQ8TB73 568 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 FBXW5Q969U6 566 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 H0YAE9 185 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ATG12O94817 140 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 HSD3B1P14060 373 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 IDH3AP50213 366 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 MAD2L1Q13257 205 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SLC9A3R2Q15599 337 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 FAM83FQ8NEG4 500 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ELMOD3Q96FG2 381 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SLC27A6Q9Y2P4 619 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 CLIC1O00299 241 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SDC3O75056 442 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 RPP14O95059 124 aaKnown RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 KIAA1024LP59773 190 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ADPRHL1Q8NDY3 354 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 RPLP0P6Q8NHW5 317 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ETNPPLQ8TBG4 499 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ZNF559Q9BR84 538 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 C1orf21Q9H246 121 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SH2B2O14492 632 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 RAB6AP20340 208 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 DGKAP23743 735 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 IDH3GP51553 393 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 RTL4Q6ZR62 310 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 LSMEM2Q8N112 164 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 OR2L3Q8NG85 312 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 EDEM2Q9BV94 578 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 M0QYV0 167 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 MAOAP21397 527 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 GIPRP48546 466 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 PTPN11Q06124 597 aaPredicted RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 TRAM1Q15629 374 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 OXER1Q8TDS5 423 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 RAD54LQ92698 747 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 TPT1P8Q9HAU6 139 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 LCHNA4D1U4 455 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 GJE1A6NN92 205 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 BPGMP07738 259 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ACAA2P42765 397 aaKnown RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 GPR143P51810 404 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 GPR162Q16538 588 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 DUSP7Q16829 419 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 TRIM46Q7Z4K8 759 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 SYNE4Q8N205 404 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 DCPSQ96C86 337 aaKnown RBP4.69□□□□□ -1.66
NEAT1-202ENST00000501122 POM121Q96HA1 1249 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ERVK-5Q9HDB9 667 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ARHGAP20Q9P2F6 1191 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 ATP8B3O60423 1300 aa4.69□□□□□ -1.66
NEAT1-202ENST00000501122 KIAA1324LA8MWY0 1029 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms