RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 JUNBP17275 347 aaPredicted RBP12.15□□□□□ -0.46
AFF3-215ENST00000498090 UGT1A6P19224 532 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 CD70P32970 193 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 GNPDA1P46926 289 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 HNRNPFP52597 415 aaKnown RBP12.15□□□□□ -0.46
AFF3-215ENST00000498090 ARSFP54793 590 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 GRSF1Q12849 480 aaKnown RBP eCLIP12.15□□□□□ -0.46
AFF3-215ENST00000498090 LMAN2Q12907 356 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 CDH18Q13634 790 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 HTR4Q13639 388 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 KIAA0040Q15053 153 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 RBM48Q5RL73 367 aaKnown RBP12.15□□□□□ -0.46
AFF3-215ENST00000498090 SERPINA9Q86WD7 417 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 ZDHHC13Q8IUH4 622 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 CLVS1Q8IUQ0 354 aaPredicted RBP12.15□□□□□ -0.46
AFF3-215ENST00000498090 OR2T12Q8NG77 320 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 FAM110BQ8TC76 370 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 MAGED4Q96JG8 741 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 MAGEB10Q96LZ2 347 aaPredicted RBP12.15□□□□□ -0.46
AFF3-215ENST00000498090 TMEM74Q96NL1 305 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 FEM1AQ9BSK4 669 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 C2orf49Q9BVC5 232 aaPredicted RBP12.15□□□□□ -0.46
AFF3-215ENST00000498090 MAGIXQ9H6Y5 334 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 CXorf21Q9HAI6 301 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 ZFYVE1Q9HBF4 777 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 DNAJB9Q9UBS3 223 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 ZNHIT2Q9UHR6 403 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 CCL27Q9Y4X3 112 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 MUC3AQ02505 3323 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 CHD5Q8TDI0 1954 aa12.15□□□□□ -0.46
AFF3-215ENST00000498090 TRIM64BA6NI03 449 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 ANHXE9PGG2 379 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 K7EPI3 171 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 GSTA4O15217 222 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 HOXC11O43248 304 aaPredicted RBP12.14□□□□□ -0.47
AFF3-215ENST00000498090 ULK1O75385 1050 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 DNAJB5O75953 348 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 PRAMEF1O95521 474 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 CPNE6O95741 557 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 SLC2A4P14672 509 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 TYRP14679 529 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 NELFEP18615 380 aaKnown RBP12.14□□□□□ -0.47
AFF3-215ENST00000498090 ACRV1P26436 265 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 HLA-FP30511 346 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 OR4D2P58180 307 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 NFATC2Q13469 925 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 MAPKAPK3Q16644 382 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 FBXO48Q5FWF7 155 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 ATG9BQ674R7 924 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 GRAMD4Q6IC98 578 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 ZNF773Q6PK81 442 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 SCIMPQ6UWF3 145 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 LYSMD3Q7Z3D4 306 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 C12orf40Q86WS4 652 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
AFF3-215ENST00000498090 APCDD1Q8J025 514 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 TCAIMQ8N3R3 496 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 DTWD1Q8N5C7 304 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 ZBTB2Q8N680 514 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 FIBINQ8TAL6 211 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 PIH1D2Q8WWB5 315 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 ACDQ96AP0 544 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 DPY30Q9C005 99 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 ACTL8Q9H568 366 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 USE1Q9NZ43 259 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 SLAMF8Q9P0V8 285 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 INTS6Q9UL03 887 aaKnown RBP12.14□□□□□ -0.47
AFF3-215ENST00000498090 BLOC1S6Q9UL45 172 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 ASB1Q9Y576 335 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 PCDHGA11Q9Y5H2 935 aa12.14□□□□□ -0.47
AFF3-215ENST00000498090 ERN1O75460 977 aaKnown RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 NFATC1O95644 943 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 KRT6AP02538 564 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 KRT6BP04259 564 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ALPLP05186 524 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 RETP07949 1114 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 THRBP10828 461 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ADH5P11766 374 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ACPPP15309 386 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 EPB42P16452 691 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 KRT6CP48668 564 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 TMBIM6P55061 237 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 CDH15P55291 814 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 YBX1P67809 324 aaKnown RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 BCL2L1Q07817 233 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 TOP3AQ13472 1001 aaPredicted RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 ABRAXAS2Q15018 415 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 PDGFRLQ15198 375 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 RFX4Q33E94 735 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 RFTN2Q52LD8 501 aaPredicted RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 GPRC6AQ5T6X5 926 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ZDHHC20Q5W0Z9 365 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 FAM219BQ5XKK7 198 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 HLA-CQ95604 372 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ESAMQ96AP7 390 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 C12orf43Q96C57 262 aaKnown RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 PPM1MQ96MI6 270 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms