RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 TYSND1Q2T9J0 566 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 NEPROQ6NW34 567 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 C16orf46Q6P387 395 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 TTC23LQ6PF05 361 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 UNC5DQ6UXZ4 953 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 CAPN12Q6ZSI9 719 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 CEP128Q6ZU80 1094 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 TMEM135Q86UB9 458 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 VRK3Q8IV63 474 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 IGDCC3Q8IVU1 814 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 DCUN1D3Q8IWE4 304 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 EXD3Q8N9H8 876 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 PYROXD1Q8WU10 500 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 SKA2Q8WVK7 121 aaPredicted RBP14.83□□□□□ -0.04
NUP50-219ENST00000497960 N4BP2L2Q92802 583 aaPredicted RBP14.83□□□□□ -0.04
NUP50-219ENST00000497960 TRAPPC9Q96Q05 1148 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 KLHL25Q9H0H3 589 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 C20orf96Q9NUD7 363 aaPredicted RBP14.83□□□□□ -0.04
NUP50-219ENST00000497960 SERTAD3Q9UJW9 196 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 PLAGL1Q9UM63 463 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 CDYLQ9Y232 598 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 VPS9D1Q9Y2B5 631 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 ZCWPW2A0A1B0GU75 182 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 ISM1B1AKI9 464 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 C21orf140B9A014 251 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 TMEM150CB9EJG8 249 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 ESR1P03372 595 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 KLK3P07288 261 aaPredicted RBP14.82□□□□□ -0.04
NUP50-219ENST00000497960 PVRP15151 417 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 UGT2B7P16662 529 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 OGNP20774 298 aaKnown RBP14.82□□□□□ -0.04
NUP50-219ENST00000497960 F8A1P23610 371 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 FMO4P31512 558 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 RAB28P51157 221 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 DNASE1L3Q13609 305 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 CRTC2Q53ET0 693 aaPredicted RBP14.82□□□□□ -0.04
NUP50-219ENST00000497960 PLEKHS1Q5SXH7 462 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 KCNMB4Q86W47 210 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 GABPB2Q8TAK5 448 aaPredicted RBP14.82□□□□□ -0.04
NUP50-219ENST00000497960 LPGAT1Q92604 370 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 TCTN2Q96GX1 697 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 FOPNLQ96NB1 174 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 OR2A14Q96R47 310 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 FAM167BQ9BTA0 163 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.82□□□□□ -0.04
NUP50-219ENST00000497960 NFU1Q9UMS0 254 aa14.82□□□□□ -0.04
NUP50-219ENST00000497960 MRPS18BQ9Y676 258 aaKnown RBP14.82□□□□□ -0.04
NUP50-219ENST00000497960 V9GYY5 206 aaPredicted RBP14.82□□□□□ -0.04
NUP50-219ENST00000497960 MSL3P1P0C860 447 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 TPBGLP0DKB5 382 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 CHRM3P20309 590 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 CYP2A7P20853 494 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 ECHS1P30084 290 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 PKLRP30613 574 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 ADARP55265 1226 aaKnown RBP14.81□□□□□ -0.04
NUP50-219ENST00000497960 KIR2DS3Q14952 304 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 KYNUQ16719 465 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 CTSL3PQ5NE16 218 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 ZNF470Q6ECI4 717 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 ZNF605Q86T29 641 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 TRIM73Q86UV7 250 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 CILP2Q8IUL8 1156 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 GSPT2Q8IYD1 628 aaKnown RBP14.81□□□□□ -0.04
NUP50-219ENST00000497960 C19orf47Q8N9M1 422 aaKnown RBP14.81□□□□□ -0.04
NUP50-219ENST00000497960 CALML6Q8TD86 181 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 CT55Q8WUE5 264 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 MR1Q95460 341 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 CERS2Q96G23 380 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 BIRC8Q96P09 236 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 GPR87Q9BY21 358 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 SLC7A5P2Q9GIP4 190 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 TSPYL1Q9H0U9 437 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 ADNPQ9H2P0 1102 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 PPANQ9NQ55 473 aaKnown RBP14.81□□□□□ -0.04
NUP50-219ENST00000497960 RRAGDQ9NQL2 400 aaPredicted RBP14.81□□□□□ -0.04
NUP50-219ENST00000497960 GEMIN8Q9NWZ8 242 aaKnown RBP14.81□□□□□ -0.04
NUP50-219ENST00000497960 SPHK1Q9NYA1 384 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 SLC39A10Q9ULF5 831 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 CRYL1Q9Y2S2 319 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 PCDHGA6Q9Y5G7 932 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 FAM169AQ9Y6X4 670 aa14.81□□□□□ -0.04
NUP50-219ENST00000497960 TLN1Q9Y490 2541 aaKnown RBP14.8□□□□□ -0.04
NUP50-219ENST00000497960 A0A0J9YY10 115 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 E5RI56 91 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 TERTO14746 1132 aaKnown RBP14.8□□□□□ -0.04
NUP50-219ENST00000497960 OAS2P29728 719 aaKnown RBP14.8□□□□□ -0.04
NUP50-219ENST00000497960 MAGEA4P43358 317 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 ITGA1P56199 1179 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 RPS15P62841 145 aaKnown RBP14.8□□□□□ -0.04
NUP50-219ENST00000497960 SLC5A12Q1EHB4 618 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 DEFB109BQ30KR1 87 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 CDHR3Q6ZTQ4 885 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 PALM2Q8IXS6 379 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 GPR135Q8IZ08 494 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 RAB42Q8N4Z0 105 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 OR1L3Q8NH93 324 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 RAD51AP1Q96B01 352 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 SLC22A18Q96BI1 424 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 CLIP3Q96DZ5 547 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms