RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 FBXO15Q8NCQ5 510 aaPredicted RBP11.53□□□□□ -0.56
CUX1-210ENST00000497815 STAG3L4Q8TBR4 150 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 ACMSDQ8TDX5 336 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 DENND1AQ8TEH3 1009 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 ZNF480Q8WV37 535 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 ANKRD7Q92527 254 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 KIAA1191Q96A73 305 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 ALKBH8Q96BT7 664 aaKnown RBP11.53□□□□□ -0.56
CUX1-210ENST00000497815 CCDC138Q96M89 665 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 GPR78Q96P69 363 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 MENTQ9BUN1 341 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 RAB11FIP5Q9BXF6 653 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 DLL3Q9NYJ7 618 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 CD274Q9NZQ7 290 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 TMEM9Q9P0T7 183 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 SPATA7Q9P0W8 599 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 NOVA2Q9UNW9 492 aaKnown RBP11.53□□□□□ -0.56
CUX1-210ENST00000497815 OARD1Q9Y530 152 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 PCDHGA1Q9Y5H4 931 aa11.53□□□□□ -0.56
CUX1-210ENST00000497815 CABIN1Q9Y6J0 2220 aa11.52□□□□□ -0.56
CUX1-210ENST00000497815 ARHGEF17Q96PE2 2063 aaPredicted RBP11.52□□□□□ -0.57
CUX1-210ENST00000497815 PIPSLA2A3N6 862 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 GOLGA6L10A6NI86 522 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 A8MU76 341 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 ISM1B1AKI9 464 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 D6RAR5 112 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 UBXN8O00124 270 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 COPEO14579 308 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 CAPN5O15484 640 aaPredicted RBP11.52□□□□□ -0.57
CUX1-210ENST00000497815 SPAG7O75391 227 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 CPNE6O95741 557 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 S100BP04271 92 aaPredicted RBP11.52□□□□□ -0.57
CUX1-210ENST00000497815 MYZAPP0CAP1 466 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 COL6A2P12110 1019 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 HOXB3P14651 431 aaPredicted RBP11.52□□□□□ -0.57
CUX1-210ENST00000497815 IMPA1P29218 277 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 PNLIPRP1P54315 467 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 AP1S2P56377 157 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 INSM1Q01101 510 aaPredicted RBP11.52□□□□□ -0.57
CUX1-210ENST00000497815 PUM1Q14671 1186 aaKnown RBP eCLIP11.52□□□□□ -0.571e-6■■■■■ 27.1
CUX1-210ENST00000497815 ACAP2Q15057 778 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 ANKS6Q68DC2 871 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 AGTRAPQ6RW13 159 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 SUSD1Q6UWL2 747 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 FAM92BQ6ZTR7 304 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 TMPRSS9Q7Z410 1059 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 CROCCP2Q86T23 111 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 OR2L8Q8NGY9 312 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 MED8Q96G25 268 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 ATG10Q9H0Y0 220 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 EPB41L1Q9H4G0 881 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 SPHK1Q9NYA1 384 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 OR6C2Q9NZP2 312 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 TMEM216Q9P0N5 145 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 STOX2Q9P2F5 926 aaPredicted RBP11.52□□□□□ -0.57
CUX1-210ENST00000497815 CPSF2Q9P2I0 782 aaKnown RBP11.52□□□□□ -0.57
CUX1-210ENST00000497815 XPR1Q9UBH6 696 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.57
CUX1-210ENST00000497815 FAM186AA6NE01 2351 aa11.52□□□□□ -0.57
CUX1-210ENST00000497815 FAM221BA6H8Z2 402 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 C2orf74A8MZ97 194 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 NTN3O00634 580 aaPredicted RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 KIF1CO43896 1103 aaKnown RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 KERAO60938 352 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 RASSF9O75901 435 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 ANXA5P08758 320 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 UGT2B7P16662 529 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 PSMB5P28074 263 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 PEBP1P30086 187 aaKnown RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 RPA3P35244 121 aaPredicted RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 HSD17B2P37059 387 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 ID4P47928 161 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 KPNA2P52292 529 aaKnown RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 NAE1Q13564 534 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 TGFBIQ15582 683 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 CYP2A13Q16696 494 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 C18orf21Q32NC0 220 aaPredicted RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 FBXO48Q5FWF7 155 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 TECRLQ5HYJ1 363 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 PHF19Q5T6S3 580 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 N4BP2L1Q5TBK1 243 aaPredicted RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 THEMIS2Q5TEJ8 643 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 HES3Q5TGS1 186 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 TMEM71Q6P5X7 295 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 WDR74Q6RFH5 385 aaPredicted RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 ZNF574Q6ZN55 896 aaPredicted RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 RBM44Q6ZP01 1051 aaKnown RBP11.51□□□□□ -0.57
CUX1-210ENST00000497815 SH2D5Q6ZV89 423 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 B3GNT8Q7Z7M8 397 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 TRIM73Q86UV7 250 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 PLXDC1Q8IUK5 500 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 FAM20CQ8IXL6 584 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 WDR48Q8TAF3 677 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 SMPDL3AQ92484 453 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 PYCR2Q96C36 320 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 FBXL8Q96CD0 374 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 ZDHHC12Q96GR4 267 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 PPM1MQ96MI6 270 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 SMC6Q96SB8 1091 aa11.51□□□□□ -0.57
CUX1-210ENST00000497815 ATOH8Q96SQ7 321 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms