RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LMTK2Q8IWU2 1503 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 UNC13BO14795 1591 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 ILVBLA1L0T0 632 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 FAM47DPA6NHR8 397 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 M0QZ24 198 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 MEIS2O14770 477 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 RHOBTB1O94844 696 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 CSN3P07498 182 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 NR2F6P10588 404 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 MPZP25189 248 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 PTPN6P29350 595 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 MTCP1P56278 107 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 MVPQ14764 893 aaKnown RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 KPNB1Q14974 876 aaKnown RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 MEP1AQ16819 746 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 USH1GQ495M9 461 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 SLC36A3Q495N2 470 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 KIAA1755Q5JYT7 1200 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 GCNT6Q5T4J0 391 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 ARHGEF16Q5VV41 709 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 PRAMEF7Q5VXH5 474 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 Q6ZRM9 215 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 ATG4DQ86TL0 474 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 SERPINA11Q86U17 422 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM151BQ8IW70 566 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 LNX2Q8N448 690 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 LEMD2Q8NC56 503 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 KIAA0895Q8NCT3 520 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 OR2AJ1Q8NGZ0 328 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 OR2T3Q8NH03 318 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 CKAP2Q8WWK9 683 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 ORAI1Q96D31 301 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 PTCD3Q96EY7 689 aaKnown RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 SIGLEC10Q96LC7 697 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 RBM14Q96PK6 669 aaKnown RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 OR6C1Q96RD1 312 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 GPA33Q99795 319 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 DDX50Q9BQ39 737 aaKnown RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 CIPCQ9C0C6 399 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM39BQ9GZU3 492 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 MVB12BQ9H7P6 319 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 MKKSQ9NPJ1 570 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 ACSS1Q9NUB1 689 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 ASIC5Q9NY37 505 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 BAIAP2L1Q9UHR4 511 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 ENTPD4Q9Y227 616 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 PADI2Q9Y2J8 665 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 NFE2L3Q9Y4A8 694 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 OAS3Q9Y6K5 1087 aaKnown RBP5.87□□□□□ -1.47
BRCA1-224ENST00000497488 ARHGAP31Q2M1Z3 1444 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 EFCAB6Q5THR3 1501 aa5.87□□□□□ -1.47
BRCA1-224ENST00000497488 SYNMO15061 1565 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PLA2R1Q13018 1463 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 NLRP1Q9C000 1473 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 NAIPQ13075 1403 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM94Q12767 1356 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 HEG1Q9ULI3 1381 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 GAGE12BA1L429 117 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 GAGE12HA6NDE8 117 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM200CA6NKL6 621 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 EIF4E1BA6NMX2 242 aaKnown RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 H0Y8G0 127 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 CTAGE5O15320 804 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 XRCC3O43542 346 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PRAF2O60831 178 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 TOM1L1O75674 476 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 NCR1O76036 304 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 NFATC1O95644 943 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 CH25HO95992 272 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 C9P02748 559 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 LIPFP07098 398 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 MMP10P09238 476 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 OR2T7P0C7T2 308 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 TFPIP10646 304 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 ZNF18P17022 549 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 DRD5P21918 477 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 CALB2P22676 271 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 SSTR4P31391 388 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 MMP13P45452 471 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 SNRPEP62304 92 aaKnown RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 GRIK2Q13002 908 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PLD1Q13393 1074 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PTPRRQ15256 657 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM41BQ5BJD5 291 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 C9orf50Q5SZB4 431 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 ALS2CLQ60I27 953 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 LAIR1Q6GTX8 287 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 ANKRD54Q6NXT1 300 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 METAP1DQ6UB28 335 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 MPZL3Q6UWV2 235 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 LRRC70Q7Z2Q7 622 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 ASPGQ86U10 573 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM126BQ8IUX1 230 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 SLC22A9Q8IVM8 553 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 ZDHHC21Q8IVQ6 265 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 FADS6Q8N9I5 356 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PAPD5Q8NDF8 572 aaKnown RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 CPEB3Q8NE35 698 aaKnown RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 FAM71CQ8NEG0 241 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 DQX1Q8TE96 717 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms