RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SPDYCQ5MJ68 293 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 C20orf194Q5TEA3 1177 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 TMPRSS11BQ86T26 416 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 RTN4RL2Q86UN3 420 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 DYRK2Q92630 601 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 ANKRD9Q96BM1 317 aaPredicted RBP3.31□□□□□ -1.88
CD46-218ENST00000496723 DHX58Q96C10 678 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 POM121L2Q96KW2 1035 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 SFXN2Q96NB2 322 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 RAD9AQ99638 391 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 APOL6Q9BWW8 343 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 MIS12Q9H081 205 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 Q9N2K0 584 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 GKN1Q9NS71 199 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 SPHK1Q9NYA1 384 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 FBXO2Q9UK22 296 aaPredicted RBP3.31□□□□□ -1.88
CD46-218ENST00000496723 PADI2Q9Y2J8 665 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 hCG_1809904A0A1W2PP81 198 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 A0A1W2PPE2 198 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 A0A1W2PR64 198 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 ADAM20O43506 726 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 EXTL3O43909 919 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 ERAL1O75616 437 aaKnown RBP3.3□□□□□ -1.88
CD46-218ENST00000496723 ZFAND5O76080 213 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 STARD3NLO95772 234 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 ABCB1P08183 1280 aaPredicted RBP3.3□□□□□ -1.88
CD46-218ENST00000496723 CDH3P22223 829 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 RPL21P46778 160 aaKnown RBP3.3□□□□□ -1.88
CD46-218ENST00000496723 ZNF75DP51815 510 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 MAZP56270 477 aaKnown RBP3.3□□□□□ -1.88
CD46-218ENST00000496723 HSPB3Q12988 150 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 SQLEQ14534 574 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 UGP2Q16851 508 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 ODF4Q2M2E3 257 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 XKR3Q5GH77 459 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 GARNL3Q5VVW2 1013 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 ARHGAP22Q7Z5H3 698 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 LACC1Q8IV20 430 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 KIRREL3Q8IZU9 778 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 LSMEM2Q8N112 164 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 MARVELD2Q8N4S9 558 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 RAB42Q8N4Z0 105 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 NIPA2Q8N8Q9 360 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 TSPAN14Q8NG11 270 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 OR52N5Q8NH56 324 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 SYN2Q92777 582 aaPredicted RBP3.3□□□□□ -1.88
CD46-218ENST00000496723 DGAT2Q96PD7 388 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 SEPHS2Q99611 448 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 SYT15Q9BQS2 421 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 NUDT16L1Q9BRJ7 211 aaKnown RBP3.3□□□□□ -1.88
CD46-218ENST00000496723 CCDC106Q9BWC9 280 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 ATP13A3Q9H7F0 1226 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 P4HTMQ9NXG6 502 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 RNF186Q9NXI6 227 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 HAO2Q9NYQ3 351 aa3.3□□□□□ -1.88
CD46-218ENST00000496723 DDX25Q9UHL0 483 aaKnown RBP3.3□□□□□ -1.88
CD46-218ENST00000496723 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 MSGN1A6NI15 193 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 K7ENM7 598 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 KHDRBS3O75525 346 aaKnown RBP3.29□□□□□ -1.88
CD46-218ENST00000496723 LINGO3P0C6S8 592 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 DPEP1P16444 411 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 TYMPP19971 482 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 MTHFRP42898 656 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 HNRNPKP61978 463 aaKnown RBP eCLIP3.29□□□□□ -1.88
CD46-218ENST00000496723 IFI35P80217 286 aaPredicted RBP3.29□□□□□ -1.88
CD46-218ENST00000496723 MAT1AQ00266 395 aaKnown RBP3.29□□□□□ -1.88
CD46-218ENST00000496723 TAF10Q12962 218 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 CA9Q16790 459 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 SGSM1Q2NKQ1 1148 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 SLC25A53Q5H9E4 307 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 C6orf163Q5TEZ5 329 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 C11orf63Q6NUN7 778 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 BRINP3Q76B58 766 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 NUDT13Q86X67 352 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 DCLK2Q8N568 766 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 ZNF614Q8N883 585 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 AVL9Q8NBF6 648 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 MAPK1IP1LQ8NDC0 245 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 ZNF830Q96NB3 372 aaPredicted RBP3.29□□□□□ -1.88
CD46-218ENST00000496723 FUCA2Q9BTY2 467 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 CLEC7AQ9BXN2 247 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 PITPNM3Q9BZ71 974 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 OR2B2Q9GZK3 357 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 CPVLQ9H3G5 476 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 PRMT7Q9NVM4 692 aaPredicted RBP3.29□□□□□ -1.88
CD46-218ENST00000496723 EPHA6Q9UF33 1036 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 GRID1Q9ULK0 1009 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 ABT1Q9ULW3 272 aaKnown RBP3.29□□□□□ -1.88
CD46-218ENST00000496723 PRSS21Q9Y6M0 314 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 RNF215Q9Y6U7 377 aa3.29□□□□□ -1.88
CD46-218ENST00000496723 ENO4A6NNW6 628 aa3.28□□□□□ -1.88
CD46-218ENST00000496723 H7C423 109 aa3.28□□□□□ -1.88
CD46-218ENST00000496723 TRUB2O95900 331 aaKnown RBP3.28□□□□□ -1.88
CD46-218ENST00000496723 MPZP25189 248 aa3.28□□□□□ -1.88
CD46-218ENST00000496723 IL11RAQ14626 422 aa3.28□□□□□ -1.88
CD46-218ENST00000496723 HERC3Q15034 1050 aa3.28□□□□□ -1.88
CD46-218ENST00000496723 XKR6Q5GH73 641 aa3.28□□□□□ -1.88
CD46-218ENST00000496723 CFAP58Q5T655 872 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms