RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 VIPR2P41587 438 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 GRIA2P42262 883 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 CASP2P42575 452 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 MTHFRP42898 656 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 NME5P56597 212 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 EEFSECP57772 596 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 SEMG2Q02383 582 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TMEM115Q12893 351 aaPredicted RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 RALGDSQ12967 914 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 CSTF3Q12996 717 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 ADGRE1Q14246 886 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 GRB7Q14451 532 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 HIST2H2ACQ16777 129 aaPredicted RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 PHKG1Q16816 387 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 DPY19L1Q2PZI1 675 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 AP5B1Q2VPB7 878 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TMEM52BQ4KMG9 183 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 BCL7AQ4VC05 210 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 MTX3Q5HYI7 312 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 PAGE2BQ5JRK9 111 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TMEM215Q68D42 235 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 HIST2H2AA3Q6FI13 130 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TMEM220Q6QAJ8 160 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 CYP20A1Q6UW02 462 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 LAYNQ6UX15 382 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ERN2Q76MJ5 926 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 LPCAT2Q7L5N7 544 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TRMT11Q7Z4G4 463 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 TECPR1Q7Z6L1 1165 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 KBTBD6Q86V97 674 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 NLRP8Q86W28 1048 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 C12orf40Q86WS4 652 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ZFAND4Q86XD8 727 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 PROSER1Q86XN7 944 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TRAPPC5Q8IUR0 188 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 AQP12AQ8IXF9 295 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 C12orf76Q8N812 135 aaPredicted RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 OR9I1Q8NGQ6 314 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 HM13Q8TCT9 377 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ASB11Q8WXH4 323 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 SORCS1Q8WY21 1168 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ZUFSPQ96AP4 578 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ESAMQ96AP7 390 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ELSPBP1Q96BH3 223 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 LRRC58Q96CX6 371 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 MRPL38Q96DV4 380 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 METTL2AQ96IZ6 378 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 KCTD14Q9BQ13 255 aaPredicted RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 ECSITQ9BQ95 431 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 WRAP53Q9BUR4 548 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 C1orf50Q9BV19 199 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 OSBPL6Q9BZF3 934 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 NKX2-4Q9H2Z4 354 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TUBB1Q9H4B7 451 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 IGFLR1Q9H665 355 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 YY1AP1Q9H869 796 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 FBRSL1Q9HCM7 1045 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 ITM2CQ9NQX7 267 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 C8orf4Q9NR00 106 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 C1orf109Q9NX04 203 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 GPRC5BQ9NZH0 403 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TMEM181Q9P2C4 612 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ABCD2Q9UBJ2 740 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 SCOCQ9UIL1 159 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 MAGEL2Q9UJ55 1249 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ADAMTS6Q9UKP5 1117 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 PDE10AQ9Y233 779 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 CCDC88CQ9P219 2028 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 TP53BP1Q12888 1972 aaPredicted RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 NUP214P35658 2090 aaPredicted RBP6.74□□□□□ -1.33
USP39-219ENST00000496047 MDC1Q14676 2089 aaKnown RBP6.74□□□□□ -1.33
USP39-219ENST00000496047 C17orf113A0A1B0GUU1 675 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 SERTM1A2A2V5 107 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 MAGEA13PA6NCF6 341 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 GRXCR1A8MXD5 290 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 GPR89AB7ZAQ6 455 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 E7ENX8 843 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 GFYI3L273 518 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 MANBAO00462 879 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 FBP2O00757 339 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 FFAR3O14843 346 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 CASQ2O14958 399 aaPredicted RBP6.74□□□□□ -1.33
USP39-219ENST00000496047 TRIM24O15164 1050 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 INPP4BO15327 924 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 GPR42O15529 346 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 TAPBPO15533 448 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 HNRNPRO43390 633 aaKnown RBP6.74□□□□□ -1.33
USP39-219ENST00000496047 TSPAN6O43657 245 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 LILRA1O75019 489 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 PSIP1O75475 530 aaKnown RBP6.74□□□□□ -1.33
USP39-219ENST00000496047 SLCO2B1O94956 709 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 KAT7O95251 611 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 GPIP06744 558 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 C8BP07358 591 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 GPR89BP0CG08 455 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 UMPSP11172 480 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 C6P13671 934 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 HSD17B1P14061 328 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 JUPP14923 745 aa6.74□□□□□ -1.33
USP39-219ENST00000496047 PRDX3P30048 256 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms