RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 QDPRP09417 244 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 HSPA8P11142 646 aaKnown RBP4.1□□□□□ -1.75
SMC4-224ENST00000494612 PDGFRAP16234 1089 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 MNDAP41218 407 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 PDX1P52945 283 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 DLX5P56178 289 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 UBASH3AP57075 661 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 PPIGQ13427 754 aaKnown RBP eCLIP4.1□□□□□ -1.75
SMC4-224ENST00000494612 SYT14P1Q58G82 188 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 STPG1Q5TH74 334 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 TRAT1Q6PIZ9 186 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 ZNF554Q86TJ5 538 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 TLK2Q86UE8 772 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 NFE4Q86UQ8 179 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 PLD3Q8IV08 490 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 EID3Q8N140 333 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 IQUBQ8NA54 791 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 THAP8Q8NA92 274 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 NPEPL1Q8NDH3 523 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 ROBO4Q8WZ75 1007 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 TMEM143Q96AN5 459 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 NSL1Q96IY1 281 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 SPATA17Q96L03 361 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 SGK494Q96LW2 274 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 INPP4AQ96PE3 977 aaPredicted RBP4.1□□□□□ -1.75
SMC4-224ENST00000494612 ARRDC1-AS1Q9H2J1 176 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 GRPEL1Q9HAV7 217 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 ZBTB20Q9HC78 741 aaPredicted RBP4.1□□□□□ -1.75
SMC4-224ENST00000494612 SH3GLB2Q9NR46 395 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.1□□□□□ -1.75
SMC4-224ENST00000494612 CACNG4Q9UBN1 327 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 LIPGQ9Y5X9 500 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 CEP170Q5SW79 1584 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 KDM6BO15054 1643 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 PRR32B1ATL7 298 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 RECQL5O94762 991 aaPredicted RBP4.09□□□□□ -1.75
SMC4-224ENST00000494612 CGAP01215 116 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 IGHV2-70P01814 119 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 POU3F1Q03052 451 aaPredicted RBP4.09□□□□□ -1.75
SMC4-224ENST00000494612 LGALS3BPQ08380 585 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 GAGE5Q13069 117 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 GAGE6Q13070 117 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 DMP1Q13316 513 aaPredicted RBP4.09□□□□□ -1.75
SMC4-224ENST00000494612 ITGA7Q13683 1181 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 ZNF273Q14593 569 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 MCMDC2Q4G0Z9 681 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 WDR38Q5JTN6 314 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 ELFN2Q5R3F8 820 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 ERN2Q76MJ5 926 aaKnown RBP4.09□□□□□ -1.75
SMC4-224ENST00000494612 RTN4RL2Q86UN3 420 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 THNSL1Q8IYQ7 743 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 GRHL3Q8TE85 626 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 EXOC4Q96A65 974 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 MOB3AQ96BX8 217 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 SCRN2Q96FV2 425 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 NODALQ96S42 347 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 RAD9AQ99638 391 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 MGME1Q9BQP7 344 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 URM1Q9BTM9 101 aaKnown RBP4.09□□□□□ -1.75
SMC4-224ENST00000494612 SLC25A23Q9BV35 468 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 GTPBP2Q9BX10 602 aaKnown RBP4.09□□□□□ -1.75
SMC4-224ENST00000494612 SLC2A11Q9BYW1 496 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 FZD8Q9H461 694 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 ECHDC1Q9NTX5 307 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 FAM118AQ9NWS6 357 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 POLLQ9UGP5 575 aa4.09□□□□□ -1.75
SMC4-224ENST00000494612 A0A1W2PRQ8 180 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 ANKRD61A6NGH8 418 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 P2RY10O00398 339 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 CLDN4O14493 209 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 PTGESO14684 152 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 PRKNO60260 465 aaPredicted RBP4.08□□□□□ -1.76
SMC4-224ENST00000494612 SLC22A3O75751 556 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 IGLV2-11P01706 119 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 UMODP07911 640 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 TCEA1P23193 301 aaKnown RBP4.08□□□□□ -1.76
SMC4-224ENST00000494612 CUX1P39880 1505 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 LHX1P48742 406 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 B3GALT5-AS1P59052 145 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 TFCP2Q12800 502 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 CA9Q16790 459 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 ITPRIPL2Q3MIP1 535 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 TECRLQ5HYJ1 363 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 SPDYCQ5MJ68 293 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 C11orf63Q6NUN7 778 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 DCLRE1AQ6PJP8 1040 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 SMIM29Q86T20 159 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 STPG4Q8N801 248 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 ZNF383Q8NA42 475 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 PPFIBP2Q8ND30 876 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 SETD6Q8TBK2 473 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 FCAMRQ8WWV6 532 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 ATL1Q8WXF7 558 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 HSD17B8Q92506 261 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 EXT2Q93063 718 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 DHX58Q96C10 678 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 SLC47A1Q96FL8 570 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 DOCK7Q96N67 2140 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 MUS81Q96NY9 551 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms