RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 PKP4Q99569 1192 aa22.65■■□□□ 1.22
CLIC3-203ENST00000494426 ASPSCR1Q9BZE9 553 aa22.65■■□□□ 1.22
CLIC3-203ENST00000494426 KLHL25Q9H0H3 589 aa22.65■■□□□ 1.22
CLIC3-203ENST00000494426 RHOJQ9H4E5 214 aa22.65■■□□□ 1.22
CLIC3-203ENST00000494426 NINJ2Q9NZG7 142 aa22.65■■□□□ 1.22
CLIC3-203ENST00000494426 BTRCQ9Y297 605 aa22.65■■□□□ 1.22
CLIC3-203ENST00000494426 CELSR3Q9NYQ7 3312 aa22.64■■□□□ 1.22
CLIC3-203ENST00000494426 CATP04040 527 aaKnown RBP22.64■■□□□ 1.21
CLIC3-203ENST00000494426 RHOXF2BP0C7M4 288 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 ERGP11308 486 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 ITPKBP27987 946 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 TAS2R39P59534 338 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 CEACAM20Q6UY09 585 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 TAX1BP1Q86VP1 789 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 FAM20CQ8IXL6 584 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 HMGCLL1Q8TB92 370 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 LINGO1Q96FE5 620 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 VPS39Q96JC1 886 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 TEFMQ96QE5 360 aaKnown RBP22.64■■□□□ 1.21
CLIC3-203ENST00000494426 FMO2Q99518 471 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 RHOXF2Q9BQY4 288 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 RAB11FIP5Q9BXF6 653 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 SPATA7Q9P0W8 599 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 ADAMTS6Q9UKP5 1117 aa22.64■■□□□ 1.21
CLIC3-203ENST00000494426 MTO1Q9Y2Z2 717 aaKnown RBP22.64■■□□□ 1.21
CLIC3-203ENST00000494426 A0A1W2PPV9 198 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 SPAG6O75602 509 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 FGF5P12034 268 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 RGS4P49798 205 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 CLN3Q13286 438 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 PDAP1Q13442 181 aaKnown RBP22.63■■□□□ 1.21
CLIC3-203ENST00000494426 FASTKQ14296 549 aaKnown RBP22.63■■□□□ 1.21
CLIC3-203ENST00000494426 IL11RAQ14626 422 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 TGIF1Q15583 401 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 CYP2A13Q16696 494 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 SLC5A12Q1EHB4 618 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 DTX1Q86Y01 620 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 KCNE4Q8WWG9 221 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 CPNE1Q99829 537 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 ZPBPQ9BS86 351 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 SSUH2Q9Y2M2 353 aa22.63■■□□□ 1.21
CLIC3-203ENST00000494426 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.62■■□□□ 1.21
CLIC3-203ENST00000494426 RRP8O43159 456 aaKnown RBP22.62■■□□□ 1.21
CLIC3-203ENST00000494426 FAM155BO75949 473 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 SAT1P21673 171 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 CD82P27701 267 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 STX2P32856 288 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 GP5P40197 560 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 ARL4DP49703 201 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 EFTUD2Q15029 972 aaKnown RBP eCLIP22.62■■□□□ 1.21
CLIC3-203ENST00000494426 GPR19Q15760 415 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 ZIC1Q15915 447 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 LRRC8EQ6NSJ5 796 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 UBE2R2Q712K3 238 aaPredicted RBP22.62■■□□□ 1.21
CLIC3-203ENST00000494426 CEP97Q8IW35 865 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 SPACA3Q8IXA5 215 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 PPM1NQ8N819 430 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 RBBP8Q99708 897 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 DPH1Q9BZG8 443 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 CDC42EP4Q9H3Q1 356 aaKnown RBP22.62■■□□□ 1.21
CLIC3-203ENST00000494426 SOHLH2Q9NX45 425 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 NFU1Q9UMS0 254 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 PCDHB11Q9Y5F2 797 aa22.62■■□□□ 1.21
CLIC3-203ENST00000494426 ZFHX4Q86UP3 3567 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 A0A0J9YY10 115 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 ZBTB14O43829 449 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 LIPCP11150 499 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 IL2P60568 153 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 ACY1Q03154 408 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 TUBB3Q13509 450 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 ZNF460Q14592 562 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 CEP128Q6ZU80 1094 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 CTAGE3PQ8IX95 158 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 IFT20Q8IY31 132 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 ZNF501Q96CX3 271 aaPredicted RBP22.61■■□□□ 1.21
CLIC3-203ENST00000494426 RNF31Q96EP0 1072 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 SLC12A9Q9BXP2 914 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 TSPYL1Q9H0U9 437 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 FAM60AQ9NP50 221 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 FGF21Q9NSA1 209 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 LNPEPQ9UIQ6 1025 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 IKZF3Q9UKT9 509 aa22.61■■□□□ 1.21
CLIC3-203ENST00000494426 KLK10O43240 276 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 WISP3O95389 354 aaPredicted RBP22.6■■□□□ 1.21
CLIC3-203ENST00000494426 TIAF1O95411 115 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 ZNF37AP17032 561 aaPredicted RBP22.6■■□□□ 1.21
CLIC3-203ENST00000494426 ZNF28P17035 718 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 OAS2P29728 719 aaKnown RBP22.6■■□□□ 1.21
CLIC3-203ENST00000494426 LRRC69Q6ZNQ3 347 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 TIPARPQ7Z3E1 657 aaKnown RBP22.6■■□□□ 1.21
CLIC3-203ENST00000494426 MYO1HQ8N1T3 1032 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 RAB42Q8N4Z0 105 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 C19orf47Q8N9M1 422 aaKnown RBP22.6■■□□□ 1.21
CLIC3-203ENST00000494426 ZNF480Q8WV37 535 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 HNRNPLLQ8WVV9 542 aaKnown RBP22.6■■□□□ 1.21
CLIC3-203ENST00000494426 SLC22A18Q96BI1 424 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 PDLIM5Q96HC4 596 aaKnown RBP22.6■■□□□ 1.21
CLIC3-203ENST00000494426 GPR22Q99680 433 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 FUT8Q9BYC5 575 aa22.6■■□□□ 1.21
CLIC3-203ENST00000494426 PDE7BQ9NP56 450 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms