RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 KATNA1O75449 491 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 CRCPO75575 148 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 ESRRBO95718 433 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 RPN2P04844 631 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 SERPINA6P08185 405 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 TDGF1P13385 188 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 CCNG1P51959 295 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 CSTF1Q05048 431 aaKnown RBP20.03■□□□□ 0.8
KPNA1-210ENST00000494339 NAE1Q13564 534 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 SLC9B1Q4ZJI4 515 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 EPGNQ6UW88 154 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 C1orf210Q8IVY1 113 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 CLYBLQ8N0X4 340 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 TMEM105Q8N8V8 129 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 SNX31Q8N9S9 440 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 LMNTD1Q8N9Z9 388 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 ZNF480Q8WV37 535 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 RAD51AP1Q96B01 352 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 FAR2Q96K12 515 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 FERD3LQ96RJ6 166 aa20.03■□□□□ 0.8
KPNA1-210ENST00000494339 TRIT1Q9H3H1 467 aaKnown RBP20.03■□□□□ 0.8
KPNA1-210ENST00000494339 A0A1W2PR77 199 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 FCHO1O14526 889 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 OR4F21O95013 312 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 UNC5CO95185 931 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 EML2O95834 649 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 ERVPABLB-1P60509 514 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 SRSF5Q13243 272 aaKnown RBP20.02■□□□□ 0.8
KPNA1-210ENST00000494339 LETMD1Q6P1Q0 360 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 ALYREFQ86V81 257 aaKnown RBP20.02■□□□□ 0.8
KPNA1-210ENST00000494339 PARGQ86W56 976 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 SYTL1Q8IYJ3 562 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 MAML2Q8IZL2 1156 aaPredicted RBP20.02■□□□□ 0.8
KPNA1-210ENST00000494339 IL17FQ96PD4 163 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 DUSP15Q9H1R2 295 aaPredicted RBP20.02■□□□□ 0.8
KPNA1-210ENST00000494339 INTS7Q9NVH2 962 aaKnown RBP20.02■□□□□ 0.8
KPNA1-210ENST00000494339 SCHIP1Q9P0W5 487 aaPredicted RBP20.02■□□□□ 0.8
KPNA1-210ENST00000494339 TIMM22Q9Y584 194 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 WDFY4Q6ZS81 3184 aa20.02■□□□□ 0.8
KPNA1-210ENST00000494339 GOLGA8QA0A0J9YX86 632 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 GOLGA8OA6NCC3 632 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 GOLGA8NF8WBI6 632 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 HNRNPCL1O60812 293 aaKnown RBP20.02■□□□□ 0.79
KPNA1-210ENST00000494339 OTCP00480 354 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 FGF4P08620 206 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 ILF3Q12906 894 aaKnown RBP eCLIP20.02■□□□□ 0.791e-7■■■■■ 33.5
KPNA1-210ENST00000494339 TRAF3Q13114 568 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 TSTA3Q13630 321 aaPredicted RBP20.02■□□□□ 0.79
KPNA1-210ENST00000494339 GRB7Q14451 532 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 KANK2Q63ZY3 851 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 CDYL2Q8N8U2 506 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 OR4F6Q8NGB9 312 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 NRTNQ99748 197 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 WDR55Q9H6Y2 383 aaPredicted RBP20.02■□□□□ 0.79
KPNA1-210ENST00000494339 DNAJC11Q9NVH1 559 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 DNAJC15Q9Y5T4 150 aa20.02■□□□□ 0.79
KPNA1-210ENST00000494339 DNAJC8O75937 253 aaPredicted RBP20.01■□□□□ 0.79
KPNA1-210ENST00000494339 EPORP19235 508 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 PIK3CGP48736 1102 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 PKNOX1P55347 436 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 BTKQ06187 659 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 TUBB3Q13509 450 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 KRT72Q14CN4 511 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 TBCCQ15814 346 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 UGT3A2Q3SY77 523 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 MILR1Q7Z6M3 343 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 THOC6Q86W42 341 aaKnown RBP20.01■□□□□ 0.79
KPNA1-210ENST00000494339 NRROSQ86YC3 692 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 DCP2Q8IU60 420 aaKnown RBP20.01■□□□□ 0.79
KPNA1-210ENST00000494339 TBC1D21Q8IYX1 336 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 C1orf216Q8TAB5 229 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 NMUR2Q9GZQ4 415 aa20.01■□□□□ 0.79
KPNA1-210ENST00000494339 TLR4O00206 839 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 EPHA3P29320 983 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 HALP42357 657 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 RASSF2P50749 326 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 KRT33BQ14525 404 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 RPE65Q16518 533 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 METTL21CQ5VZV1 264 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 LPCAT2Q7L5N7 544 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 IQCHQ86VS3 1027 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 WDR5BQ86VZ2 330 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 LONP2Q86WA8 852 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 PHACTR4Q8IZ21 702 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 OR56A3Q8NH54 315 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 DNASE2BQ8WZ79 361 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 PRAMEF33A0A0G2JMD5 474 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 TRPC5OSA6NMA1 111 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 CELA2BP08218 269 aaPredicted RBP20■□□□□ 0.79
KPNA1-210ENST00000494339 PNLIPRP1P54315 467 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 NCALDP61601 193 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 TBPL1P62380 186 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 FASTKQ14296 549 aaKnown RBP20■□□□□ 0.79
KPNA1-210ENST00000494339 WDR45BQ5MNZ6 344 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 MYLK4Q86YV6 388 aaPredicted RBP20■□□□□ 0.79
KPNA1-210ENST00000494339 C2orf73Q8N5S3 287 aaPredicted RBP20■□□□□ 0.79
KPNA1-210ENST00000494339 GPBAR1Q8TDU6 330 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 TWIST2Q8WVJ9 160 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 OR52B2Q96RD2 323 aa20■□□□□ 0.79
KPNA1-210ENST00000494339 STK38LQ9Y2H1 464 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms