RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 WISP3O95389 354 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 ZBTB11O95625 1053 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 C8GP07360 202 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 ERGP11308 486 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 MAP4P27816 1152 aaKnown RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 TNFRSF8P28908 595 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 PMS2P54278 862 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 SLC12A2P55011 1212 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 TUBB4BP68371 445 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 FASTKQ14296 549 aaKnown RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 USP10Q14694 798 aaKnown RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 KIR2DS3Q14952 304 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 CYP2A13Q16696 494 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 ANKS6Q68DC2 871 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 TRMT10CQ7L0Y3 403 aaKnown RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 CLEC14AQ86T13 490 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 TAX1BP1Q86VP1 789 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 KMT5CQ86Y97 462 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 NKAPQ8N5F7 415 aaKnown RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 UHMK1Q8TAS1 419 aaKnown RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 HMGCLL1Q8TB92 370 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 ANKRD49Q8WVL7 239 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 ZCCHC14Q8WYQ9 949 aaKnown RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 FGF11Q92914 225 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 PMEPA1Q969W9 287 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 TRAPPC9Q96Q05 1148 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 SLC12A9Q9BXP2 914 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 TXLNGYQ9BZA5 131 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 POPDC3Q9HBV1 291 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 GPAMQ9HCL2 828 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 APMAPQ9HDC9 416 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 THSD1Q9NS62 852 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 LNPEPQ9UIQ6 1025 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 IKZF3Q9UKT9 509 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 PDE10AQ9Y233 779 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 PCDHGA7Q9Y5G6 932 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 A0A1W2PPV9 198 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 NVLO15381 856 aaKnown RBP13.08□□□□□ -0.32
COL1A1-208ENST00000494334 PHGDHO43175 533 aaKnown RBP13.08□□□□□ -0.32
COL1A1-208ENST00000494334 RIPK2O43353 540 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 PRAMEF10O60809 474 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 SYF2O95926 243 aaKnown RBP13.08□□□□□ -0.32
COL1A1-208ENST00000494334 PVRP15151 417 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 FOLR1P15328 257 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 ST6GAL1P15907 406 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 STMN1P16949 149 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 CYP2A7P20853 494 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 SLC5A2P31639 672 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 HSD11B2P80365 405 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 FOXM1Q08050 763 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 SP140Q13342 867 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 KCNAB1Q14722 419 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 ZKSCAN8Q15776 578 aaPredicted RBP13.08□□□□□ -0.32
COL1A1-208ENST00000494334 SLC5A12Q1EHB4 618 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 TMEM164Q5U3C3 297 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 TRIM73Q86UV7 250 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 PROSER1Q86XN7 944 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 FAM20CQ8IXL6 584 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 D2HGDHQ8N465 521 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 MCOLN3Q8TDD5 553 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 SLC22A18Q96BI1 424 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 TSPAN17Q96FV3 270 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 CTRCQ99895 268 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 B3GNT4Q9C0J1 378 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 KLHL25Q9H0H3 589 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 PARVBQ9HBI1 364 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 FOXJ2Q9P0K8 574 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 BTRCQ9Y297 605 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 B3GALT1Q9Y5Z6 326 aa13.08□□□□□ -0.32
COL1A1-208ENST00000494334 A0A087WUV0 522 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-208ENST00000494334 A0A0J9YY10 115 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 HMX2A2RU54 273 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 E7ENX8 843 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 POLR1CO15160 346 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-208ENST00000494334 SLC16A8O95907 504 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 ABHD2P08910 425 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 EBLN1P0CF75 366 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 IMPA1P29218 277 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 OAS2P29728 719 aaKnown RBP13.07□□□□□ -0.32
COL1A1-208ENST00000494334 HSD17B2P37059 387 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 ARL4DP49703 201 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 PNLIPRP1P54315 467 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 RAB15P59190 212 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 RAB10P61026 200 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 TAP2Q03519 686 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 ARHGAP19Q14CB8 494 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 UAP1Q16222 522 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-208ENST00000494334 PHKG1Q16816 387 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 DCAF12Q5T6F0 453 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 MROH9Q5TGP6 573 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 LRRC56Q8IYG6 542 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-208ENST00000494334 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
COL1A1-208ENST00000494334 ZNF480Q8WV37 535 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 SLC44A1Q8WWI5 657 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 ANKRD7Q92527 254 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 CCDC138Q96M89 665 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 OR6C1Q96RD1 312 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms