RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 KIR2DS5Q14953 304 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 HIST2H2BCQ6DN03 193 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 IRGCQ6NXR0 463 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 ABRAXAS1Q6UWZ7 409 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 CEACAM20Q6UY09 585 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 ATG14Q6ZNE5 492 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 TIFABQ6ZNK6 161 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 SH2D5Q6ZV89 423 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 LRRTM4Q86VH4 590 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 TRAPPC5Q8IUR0 188 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 C2CD4AQ8NCU7 369 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 OR4K2Q8NGD2 314 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 CALML6Q8TD86 181 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 MGARPQ8TDB4 240 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 ALKBH8Q96BT7 664 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 CDKN2AIPNLQ96HQ2 116 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 MCMBPQ9BTE3 642 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 ZSCAN5AQ9BUG6 496 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 TRIM55Q9BYV6 548 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 ASPSCR1Q9BZE9 553 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 RMI1Q9H9A7 625 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 SLC40A1Q9NP59 571 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 IL17CQ9P0M4 197 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 NFKBIL1Q9UBC1 381 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 TP53TG5Q9Y2B4 290 aa9.94□□□□□ -0.82
SOX2-OT-215ENST00000493521 UTP20O75691 2785 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 RGSL1A5PLK6 1076 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 KMOO15229 486 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 STX7O15400 261 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 PRPF4O43172 522 aaKnown RBP eCLIP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 TYROBPO43914 113 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 POP7O75817 140 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 NTRK1P04629 796 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 ANKRD34CP0C6C1 535 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 EBLN1P0CF75 366 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 AMD1P17707 334 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 PSMA3P25788 255 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 MAP4P27816 1152 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 DLSTP36957 453 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 CAPZBP47756 277 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 CD151P48509 253 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 CDKN1CP49918 316 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 RAB15P59190 212 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 GNGT1P63211 74 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 PDE1BQ01064 536 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 CHAF1BQ13112 559 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 RPE65Q16518 533 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 GPRC6AQ5T6X5 926 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 CACHD1Q5VU97 1274 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 CPZQ66K79 652 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 ZNF470Q6ECI4 717 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 TMEM220Q6QAJ8 160 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 LDB1Q86U70 411 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 LMNTD2Q8IXW0 634 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 BANPQ8N9N5 519 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 SLC38A9Q8NBW4 561 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 OR4L1Q8NH43 312 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 GABPB2Q8TAK5 448 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 CT55Q8WUE5 264 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 VPS39Q96JC1 886 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 INSM2Q96T92 566 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 MAP3K3Q99759 626 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 TIMM29Q9BSF4 260 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 ULBP3Q9BZM4 244 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 RHOJQ9H4E5 214 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 ZNF768Q9H5H4 540 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 FAM96AQ9H5X1 160 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 MLXIPLQ9NP71 852 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 SSU72Q9NP77 194 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 FBXO6Q9NRD1 293 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 PCMTD2Q9NV79 361 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 INTS9Q9NV88 658 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 NKIRAS1Q9NYS0 192 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 MARCH4Q9P2E8 410 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 FKBPLQ9UIM3 349 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 FBXO5Q9UKT4 447 aa9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 MTO1Q9Y2Z2 717 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-215ENST00000493521 COPEO14579 308 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 CD3EAPO15446 510 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 KATNA1O75449 491 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 RASSF9O75901 435 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 HAUS5O94927 633 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 ALDOAP04075 364 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 MC4RP32245 332 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 RPA3P35244 121 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 HMGCLP35914 325 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 CCNFP41002 786 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 CCR10P46092 362 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 SERPINB8P50452 374 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 SLC18A1P54219 525 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 FOXL2P58012 376 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 GABPB1Q06547 395 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 ABHD18Q0P651 414 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 TUBB8Q3ZCM7 444 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 FASTKD1Q53R41 847 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 ZNF789Q5FWF6 425 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 PWWP2BQ6NUJ5 590 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 AFTPHQ6ULP2 937 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 KIAA0408Q6ZU52 694 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 ZC3HC1Q86WB0 502 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms