RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 B3GNT4Q9C0J1 378 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 FBXO8Q9NRD0 319 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 SPHK1Q9NYA1 384 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 NINJ2Q9NZG7 142 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 FOXJ2Q9P0K8 574 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 SPATA7Q9P0W8 599 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 LNPEPQ9UIQ6 1025 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 PCDHB11Q9Y5F2 797 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 B3GALT1Q9Y5Z6 326 aa12.37□□□□□ -0.43
CLIP2-209ENST00000493166 URB1O60287 2271 aaKnown RBP12.37□□□□□ -0.43
CLIP2-209ENST00000493166 SLC9B1P1A6NJY1 282 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 POLR1CO15160 346 aaPredicted RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 MAP3K7O43318 606 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 ZBTB14O43829 449 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 SYF2O95926 243 aaKnown RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 EBLN1P0CF75 366 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 PEBP1P30086 187 aaKnown RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 GP5P40197 560 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 EIF2S3P41091 472 aaKnown RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 SLC12A2P55011 1212 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 NAB1Q13506 487 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 KCNAB1Q14722 419 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 TEX35Q5T0J7 233 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 TMTC4Q5T4D3 741 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 CYHR1Q6ZMK1 362 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 LRRC69Q6ZNQ3 347 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 UBE2R2Q712K3 238 aaPredicted RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 RELL1Q8IUW5 271 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 LINC01555Q8NAE3 123 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 ASB11Q8WXH4 323 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 SLC22A18Q96BI1 424 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 NAF1Q96HR8 494 aaKnown RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 TEFMQ96QE5 360 aaKnown RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 OR2A14Q96R47 310 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 RBBP8Q99708 897 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 ZPBPQ9BS86 351 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 PITPNM3Q9BZ71 974 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 CDC42EP4Q9H3Q1 356 aaKnown RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 APMAPQ9HDC9 416 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 NFU1Q9UMS0 254 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 PCDHGA3Q9Y5H0 932 aa12.36□□□□□ -0.43
CLIP2-209ENST00000493166 MDC1Q14676 2089 aaKnown RBP12.36□□□□□ -0.43
CLIP2-209ENST00000493166 A0A0J9YY10 115 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
CLIP2-209ENST00000493166 GFYI3L273 518 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 MYO1CO00159 1063 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 KRT37O76014 449 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 ACSL3O95573 720 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 C1QAP02745 245 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 C8GP07360 202 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 PVRP15151 417 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 FOLR1P15328 257 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 ST6GAL1P15907 406 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 CYP2A7P20853 494 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 CD82P27701 267 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 PGGT1BP53609 377 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 POU4F1Q01851 419 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 ACY1Q03154 408 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 TUBB3Q13509 450 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 ZNF460Q14592 562 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 IL11RAQ14626 422 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 EFTUD2Q15029 972 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLIP2-209ENST00000493166 SLC5A12Q1EHB4 618 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 GRTP1Q5TC63 336 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 TRIM73Q86UV7 250 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 D2HGDHQ8N465 521 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 LMNTD1Q8N9Z9 388 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 FBXO15Q8NCQ5 510 aaPredicted RBP12.35□□□□□ -0.43
CLIP2-209ENST00000493166 DENND1AQ8TEH3 1009 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 KCNE4Q8WWG9 221 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 TSPAN17Q96FV3 270 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 TRAPPC9Q96Q05 1148 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 PKP4Q99569 1192 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 MCMBPQ9BTE3 642 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 TWSG1Q9GZX9 223 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 KLHL25Q9H0H3 589 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 FANCEQ9HB96 536 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 PDE7BQ9NP56 450 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 ACSL6Q9UKU0 697 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 BTRCQ9Y297 605 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 SPTBP11277 2137 aa12.35□□□□□ -0.43
CLIP2-209ENST00000493166 ITPR1Q14643 2758 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 PABPN1LA6NDY0 278 aaKnown RBP12.34□□□□□ -0.43
CLIP2-209ENST00000493166 ZNF839A8K0R7 811 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 STMND1H3BQB6 276 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 TSPAN12O95859 305 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 ERGP11308 486 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 ZNF37AP17032 561 aaPredicted RBP12.34□□□□□ -0.43
CLIP2-209ENST00000493166 SPRP35270 261 aaPredicted RBP12.34□□□□□ -0.43
CLIP2-209ENST00000493166 HSD17B2P37059 387 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 PNLIPRP1P54315 467 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 TAS2R39P59534 338 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 SP140Q13342 867 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 USP10Q14694 798 aaKnown RBP12.34□□□□□ -0.43
CLIP2-209ENST00000493166 SLMAPQ14BN4 828 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 ARHGAP19Q14CB8 494 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms