RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CEACAM4O75871 244 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 SORBS2O94875 1100 aaKnown RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 VAPBO95292 243 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 FGGP02679 453 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 OR56A5P0C7T3 313 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 ALAS2P22557 587 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 AOAHP28039 575 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CDC25BP30305 580 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 FMO4P31512 558 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 ST13P50502 369 aaKnown RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 EIF3BP55884 814 aaKnown RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 GSDMDP57764 484 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 PRAMEP78395 509 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CCZ1BP86790 482 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CCZ1P86791 482 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 RPA4Q13156 261 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 RPS6KA1Q15418 735 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 PLEKHN1Q494U1 663 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 SLC6A19Q695T7 634 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 JMJD6Q6NYC1 403 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 TTLL10Q6ZVT0 673 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 MRGPREQ86SM8 312 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 LINC00523Q86TU6 105 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 PRSS58Q8IYP2 241 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 TBC1D21Q8IYX1 336 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 OR4N4Q8N0Y3 316 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 PRELID2Q8N945 189 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CCDC89Q8N998 374 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CPT1CQ8TCG5 803 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 HEXDCQ8WVB3 486 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 LRFN5Q96NI6 719 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 RANBP9Q96S59 729 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 MIPEPQ99797 713 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 ACAT2Q9BWD1 397 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 SOX17Q9H6I2 414 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 VPS37BQ9H9H4 285 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 FANCEQ9HB96 536 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 ABCF3Q9NUQ8 709 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 EURLQ9NYK6 297 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CTSFQ9UBX1 484 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 NDOR1Q9UHB4 597 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 SERTAD3Q9UJW9 196 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CRYL1Q9Y2S2 319 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 HECTD1Q9ULT8 2610 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 DOCK10Q96BY6 2186 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 CROCCQ5TZA2 2017 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 A0A1W2PPV9 198 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 TCP11X1B4DZS4 312 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 PSMD3O43242 534 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 CEP104O60308 925 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 BANF1O75531 89 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 C1orf105O95561 183 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 RAB40ALP0C0E4 278 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 PYGBP11216 843 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 CD9P21926 228 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 FDFT1P37268 417 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 GCGRP47871 477 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 EFNA3P52797 238 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 CUL1Q13616 776 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 NKAIN1Q4KMZ8 207 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 ACSBG2Q5FVE4 666 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 PTRHD1Q6GMV3 140 aaKnown RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 SUSD1Q6UWL2 747 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 HOOK3Q86VS8 718 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 BPHLQ86WA6 291 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 MCATQ8IVS2 390 aaKnown RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 CISD2Q8N5K1 135 aaKnown RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 OTUD6BQ8N6M0 293 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 PPHLN1Q8NEY8 458 aaKnown RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 GIMAP7Q8NHV1 300 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 SKA2Q8WVK7 121 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 THAP4Q8WY91 577 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 N4BP2L2Q92802 583 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 TCTN2Q96GX1 697 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 BIRC8Q96P09 236 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 SLC6A20Q9NP91 592 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 P4HTMQ9NXG6 502 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 IFT80Q9P2H3 777 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-211ENST00000491581 MAP4K5Q9Y4K4 846 aa8.55□□□□□ -1.04
HDAC3-211ENST00000491581 MDC1Q14676 2089 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 A0A0J9YVX5 310 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 KLHL33A6NCF5 533 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 MATN2O00339 956 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 SLCO2B1O94956 709 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 F10P00742 488 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 CELA2AP08217 269 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 STIP1P31948 543 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 RAB28P51157 221 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 VSX2P58304 361 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 DCDP81605 110 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 Q0VFX4 171 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 TSTA3Q13630 321 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 KCNJ11Q14654 390 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 SF1Q15637 639 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 INPP5JQ15735 1006 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 CCNG2Q16589 344 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 HIF1AQ16665 826 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 SYT16Q17RD7 645 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms