RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 OR9A1PQ8NGU1 263 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FLVCR1-AS1Q8TAF5 88 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 KCNE4Q8WWG9 221 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 LINGO1Q96FE5 620 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 NAF1Q96HR8 494 aaKnown RBP15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 VPS39Q96JC1 886 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 OR6C1Q96RD1 312 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ZPBPQ9BS86 351 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 NINJ2Q9NZG7 142 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 LNPEPQ9UIQ6 1025 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 BTRCQ9Y297 605 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 A0A087WV48 116 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 A0A0J9YY10 115 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 GFYI3L273 518 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 EBLN1P0CF75 366 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PVRP15151 417 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FOLR1P15328 257 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SAT1P21673 171 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 MAP4P27816 1152 aaKnown RBP15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PHBP35232 272 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 GP5P40197 560 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PGGT1BP53609 377 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 IL2P60568 153 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ACY1Q03154 408 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TUBB3Q13509 450 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 IL11RAQ14626 422 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TMTC4Q5T4D3 741 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 UBE2R2Q712K3 238 aaPredicted RBP15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TAX1BP1Q86VP1 789 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ZFAND4Q86XD8 727 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 C2orf73Q8N5S3 287 aaPredicted RBP15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PPM1NQ8N819 430 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 LMNTD1Q8N9Z9 388 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 HMGCLL1Q8TB92 370 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 DENND1AQ8TEH3 1009 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SLC22A18Q96BI1 424 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TRAPPC9Q96Q05 1148 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RBBP8Q99708 897 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CDC42EP4Q9H3Q1 356 aaKnown RBP15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ACACBO00763 2458 aa15.73■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ESPNB1AK53 854 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 STMND1H3BQB6 276 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 MAP3K7O43318 606 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ZBTB14O43829 449 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TSPAN12O95859 305 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 C8GP07360 202 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 LIPCP11150 499 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ERGP11308 486 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FGF5P12034 268 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CYP2A7P20853 494 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TAS2R39P59534 338 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SP140Q13342 867 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 EFTUD2Q15029 972 aaKnown RBP eCLIP15.72■□□□□ 0.114e-11■■■■■ 29
MSH5-SAPCD1-206ENST00000491552 CYP2A13Q16696 494 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 GRTP1Q5TC63 336 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 C19orf47Q8N9M1 422 aaKnown RBP15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PKP4Q99569 1192 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 DPH1Q9BZG8 443 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 KLHL25Q9H0H3 589 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PDE7BQ9NP56 450 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FGF21Q9NSA1 209 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RARRES3Q9UL19 164 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 NFU1Q9UMS0 254 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 MTO1Q9Y2Z2 717 aaKnown RBP15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 WDFY3Q8IZQ1 3526 aa15.72■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ZNF839A8K0R7 811 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SLC16A5O15375 505 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SYF2O95926 243 aaKnown RBP15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ZNF37AP17032 561 aaPredicted RBP15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 OAS2P29728 719 aaKnown RBP15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SPRP35270 261 aaPredicted RBP15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 HSD17B2P37059 387 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SLC12A2P55011 1212 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TUBB4BP68371 445 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 POU4F1Q01851 419 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CLN3Q13286 438 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FASTKQ14296 549 aaKnown RBP15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ARHGAP19Q14CB8 494 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 GPR19Q15760 415 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TEX35Q5T0J7 233 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PPP1R3BQ86XI6 285 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SPACA3Q8IXA5 215 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 GPR22Q99680 433 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FANCEQ9HB96 536 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 POPDC3Q9HBV1 291 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ADAMTS6Q9UKP5 1117 aa15.71■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 IGF2RP11717 2491 aa15.71■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FREM2Q5SZK8 3169 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPV9 198 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 KLK10O43240 276 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PRICKLE3O43900 615 aaPredicted RBP15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FAM155BO75949 473 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FKBP9O95302 570 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ACSL3O95573 720 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SLC16A8O95907 504 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PSMB5P28074 263 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PNLIPRP1P54315 467 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ZNF460Q14592 562 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 USP10Q14694 798 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms