RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 C4BP0C0L5 1744 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 IBTKQ9P2D0 1353 aaPredicted RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 RNF123Q5XPI4 1314 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 SH3TC1Q8TE82 1336 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 MEX3AA1L020 520 aaKnown RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 H3BQ06 376 aaPredicted RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 EIF3FO00303 357 aaPredicted RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 MAGEA11P43364 429 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 MRPS34P82930 218 aaKnown RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 CXCL9Q07325 125 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 PTP4A2Q12974 167 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 WDR43Q15061 677 aaKnown RBP eCLIP3.27□□□□□ -1.89
PHC3-213ENST00000491258 HLA-BQ31612 363 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 CST9Q5W186 159 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 USP50Q70EL3 339 aaPredicted RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 NKAPQ8N5F7 415 aaKnown RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 HPSE2Q8WWQ2 592 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 MMABQ96EY8 250 aaPredicted RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 EGLN2Q96KS0 407 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 ISCA1Q9BUE6 129 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 DGCR6LQ9BY27 220 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 TMX4Q9H1E5 349 aaPredicted RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 HYPKQ9NX55 129 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 TAB2Q9NYJ8 693 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 DBF4Q9UBU7 674 aaPredicted RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 PGAP2Q9UHJ9 254 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 FBXW11Q9UKB1 542 aa3.27□□□□□ -1.89
PHC3-213ENST00000491258 LAS1LQ9Y4W2 734 aaKnown RBP3.27□□□□□ -1.89
PHC3-213ENST00000491258 CNTNAP1P78357 1384 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 ABCC4O15439 1325 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 YDJCA8MPS7 323 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 MAP2K7O14733 419 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 ATP6V0E1O15342 81 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 PPIP5K2O43314 1243 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 ZNF217O75362 1048 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 H1F0P07305 194 aaKnown RBP3.26□□□□□ -1.89
PHC3-213ENST00000491258 GMPSP49915 693 aaPredicted RBP3.26□□□□□ -1.89
PHC3-213ENST00000491258 RPS8P62241 208 aaKnown RBP3.26□□□□□ -1.89
PHC3-213ENST00000491258 ZBED6P86452 979 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 LGALS3BPQ08380 585 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 FRG1Q14331 258 aaKnown RBP3.26□□□□□ -1.89
PHC3-213ENST00000491258 TNIP1Q15025 636 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 TAF12Q16514 161 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 PRICKLE4Q2TBC4 344 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 DEFB115Q30KQ5 88 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 WLSQ5T9L3 541 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 CDC73Q6P1J9 531 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 CORO6Q6QEF8 472 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 HACE1Q8IYU2 909 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 L3MBTL4Q8NA19 623 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 MAELQ96JY0 434 aaKnown RBP3.26□□□□□ -1.89
PHC3-213ENST00000491258 USP28Q96RU2 1077 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 FUCA2Q9BTY2 467 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 EPB41L5Q9HCM4 733 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 RANGRFQ9HD47 186 aaPredicted RBP3.26□□□□□ -1.89
PHC3-213ENST00000491258 MBNL1Q9NR56 388 aaKnown RBP3.26□□□□□ -1.89
PHC3-213ENST00000491258 PCDHB16Q9NRJ7 776 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 POLLQ9UGP5 575 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 WDR37Q9Y2I8 494 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 R3HDM2Q9Y2K5 976 aaKnown RBP3.26□□□□□ -1.89
PHC3-213ENST00000491258 COMMD10Q9Y6G5 202 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 MYH15Q9Y2K3 1946 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 BTAF1O14981 1849 aa3.26□□□□□ -1.89
PHC3-213ENST00000491258 C5P01031 1676 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 TMEM189-UBE2V1I3L0A0 370 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 J3QR06 171 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 SOCS3O14543 225 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 PEX14O75381 377 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 KHDRBS3O75525 346 aaKnown RBP3.25□□□□□ -1.89
PHC3-213ENST00000491258 PCCAP05165 728 aaPredicted RBP3.25□□□□□ -1.89
PHC3-213ENST00000491258 CNTFP26441 200 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 PIK3CAP42336 1068 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 PSMC4P43686 418 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 MAP2K1Q02750 393 aaPredicted RBP3.25□□□□□ -1.89
PHC3-213ENST00000491258 CALD1Q05682 793 aaKnown RBP3.25□□□□□ -1.89
PHC3-213ENST00000491258 PRKAA1Q13131 559 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 UBE2V1Q13404 147 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 GRAMD1BQ3KR37 738 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 CCDC184Q52MB2 194 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 DCAF10Q5QP82 559 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 LRIF1Q5T3J3 769 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 LDHAL6AQ6ZMR3 332 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 DCLK2Q8N568 766 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 TSPYL6Q8N831 410 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 CCDC191Q8NCU4 936 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 OR4C3Q8NH37 302 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 OR8K5Q8NH50 307 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 GSDMBQ8TAX9 411 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 TBC1D16Q8TBP0 767 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 GTF3AQ92664 365 aaKnown RBP3.25□□□□□ -1.89
PHC3-213ENST00000491258 GFI1Q99684 422 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 CHMP4AQ9BY43 222 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 CHST11Q9NPF2 352 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 ABT1Q9ULW3 272 aaKnown RBP3.25□□□□□ -1.89
PHC3-213ENST00000491258 RIC1Q4ADV7 1423 aa3.25□□□□□ -1.89
PHC3-213ENST00000491258 IGHV3OR16-10A0A075B7F0 116 aa3.24□□□□□ -1.89
PHC3-213ENST00000491258 BCL2L11O43521 198 aa3.24□□□□□ -1.89
PHC3-213ENST00000491258 SLC25A12O75746 678 aa3.24□□□□□ -1.89
PHC3-213ENST00000491258 CELF2O95319 508 aaKnown RBP3.24□□□□□ -1.89
PHC3-213ENST00000491258 DDX58O95786 925 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms