RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 AGTRAPQ6RW13 159 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 ZNF438Q7Z4V0 828 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 RAB44Q7Z6P3 723 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-230ENST00000491028 KLHDC8AQ8IYD2 350 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 PTGR2Q8N8N7 351 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-230ENST00000491028 OR2L8Q8NGY9 312 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 ZNF480Q8WV37 535 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 LCN9Q8WX39 176 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 SREK1Q8WXA9 508 aaKnown RBP18.07■□□□□ 0.48
MCF2L-230ENST00000491028 WWOXQ9NZC7 414 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 OR6C2Q9NZP2 312 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 PLAGL1Q9UM63 463 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 ICKQ9UPZ9 632 aa18.07■□□□□ 0.48
MCF2L-230ENST00000491028 TNPO3Q9Y5L0 923 aaKnown RBP18.07■□□□□ 0.48
MCF2L-230ENST00000491028 KRT87PA6NCN2 255 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 PPM1DO15297 605 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 BPGMP07738 259 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 CD59P13987 128 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 PNLIPP16233 465 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 CCND1P24385 295 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 OAS2P29728 719 aaKnown RBP18.06■□□□□ 0.48
MCF2L-230ENST00000491028 GPR3P46089 330 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 DUSP3P51452 185 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-230ENST00000491028 PRKAA2P54646 552 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 EPHA4P54764 986 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 DNAJB13P59910 316 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 LIPMQ5VYY2 423 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 ASCL5Q7RTU5 278 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 AMIGO1Q86WK6 493 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 SYTL1Q8IYJ3 562 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 FAM76AQ8TAV0 307 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 MGARPQ8TDB4 240 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 NAT6Q93015 286 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 PHF21BQ96EK2 531 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 PHOX2BQ99453 314 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 SLC38A3Q99624 504 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 TMEM79Q9BSE2 394 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 OXSMQ9NWU1 459 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 LRIT1Q9P2V4 623 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 CIDEBQ9UHD4 219 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 BTBD3Q9Y2F9 522 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 RNF215Q9Y6U7 377 aa18.06■□□□□ 0.48
MCF2L-230ENST00000491028 ARID1BQ8NFD5 2236 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-230ENST00000491028 LY6G6EA0A0G2JKS1 128 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 EME2A4GXA9 379 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-230ENST00000491028 TAPBPO15533 448 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 CKMT1AP12532 417 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 CHN1P15882 459 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 ALDH3A1P30838 453 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 SLC6A12P48065 614 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 WDR4P57081 412 aaKnown RBP18.05■□□□□ 0.48
MCF2L-230ENST00000491028 NAA20P61599 178 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 PCBP2Q15366 365 aaKnown RBP eCLIP18.05■□□□□ 0.48
MCF2L-230ENST00000491028 LRRC70Q7Z2Q7 622 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 C10orf107Q8IVU9 208 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 NAXDQ8IW45 347 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 OR56A3Q8NH54 315 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 MDM1Q8TC05 714 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 SMPDL3AQ92484 453 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 L3HYPDHQ96EM0 354 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 IL17FQ96PD4 163 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 PAIP2Q9BPZ3 127 aaKnown RBP18.05■□□□□ 0.48
MCF2L-230ENST00000491028 C1QTNF3Q9BXJ4 246 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 TWSG1Q9GZX9 223 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 SRMSQ9H3Y6 488 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 EPB41L1Q9H4G0 881 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 CCDC177Q9NQR7 707 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-230ENST00000491028 FAM53CQ9NYF3 392 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 U3KQA8 63 aa18.05■□□□□ 0.48
MCF2L-230ENST00000491028 C4orf47A7E2U8 309 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 E7ENX8 843 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 ZW10O43264 779 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 STK16O75716 305 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 KCNA4P22459 653 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 TBPL1P62380 186 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 HERVK_113P63132 956 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 DAB2P98082 770 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 TAP2Q03519 686 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 CAPN13Q6MZZ7 669 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-230ENST00000491028 KLHL35Q6PF15 583 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 OOSP2Q86WS3 158 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 NUDCD3Q8IVD9 361 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 LRRC56Q8IYG6 542 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-230ENST00000491028 RHBDD1Q8TEB9 315 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 SETD7Q8WTS6 366 aaKnown RBP18.04■□□□□ 0.48
MCF2L-230ENST00000491028 TMEM237Q96Q45 408 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 MECRQ9BV79 373 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 SGPP1Q9BX95 441 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 ERVK-6Q9BXR3 956 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 CD244Q9BZW8 370 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 ATG10Q9H0Y0 220 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 XKR8Q9H6D3 395 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 MLXIPLQ9NP71 852 aa18.04■□□□□ 0.48
MCF2L-230ENST00000491028 INTS9Q9NV88 658 aaKnown RBP18.04■□□□□ 0.48
MCF2L-230ENST00000491028 FRYLO94915 3013 aa18.03■□□□□ 0.48
MCF2L-230ENST00000491028 MYO15AQ9UKN7 3530 aa18.03■□□□□ 0.48
MCF2L-230ENST00000491028 TRIM13O60858 407 aa18.03■□□□□ 0.48
MCF2L-230ENST00000491028 H2AFYO75367 372 aaKnown RBP18.03■□□□□ 0.48
MCF2L-230ENST00000491028 LDOC1O95751 146 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-230ENST00000491028 RPS17P08708 135 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms