RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CD274Q9NZQ7 290 aa18.92■□□□□ 0.62
SNAPC3-206ENST00000490969 TMA7Q9Y2S6 64 aaKnown RBP18.92■□□□□ 0.62
SNAPC3-206ENST00000490969 HS3ST4Q9Y661 456 aa18.92■□□□□ 0.62
SNAPC3-206ENST00000490969 GBF1Q92538 1859 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 PIRTP0C851 137 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 HAPLN1P10915 354 aaPredicted RBP18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 PTGR1Q14914 329 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 RUNDC3AQ59EK9 446 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 KDM4DQ6B0I6 523 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 NLGN4XQ8N0W4 816 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 IPCEF1Q8WWN9 437 aaPredicted RBP18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 MYLPFQ96A32 169 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 PYURFQ96I23 114 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 CDADC1Q9BWV3 514 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 RASSF1Q9NS23 344 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 NPAP1Q9NZP6 1156 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 NDRG4Q9ULP0 352 aaKnown RBP18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 RNF6Q9Y252 685 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 PDZK1P1A8MUH7 402 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 DSCR3O14972 297 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 KMOO15229 486 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 CHRNB1P11230 501 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 IL1RNP18510 177 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 EFNA1P20827 205 aaPredicted RBP18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 GADD45AP24522 165 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 DEFA1P59665 94 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 DEFA3P59666 94 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 E2F2Q14209 437 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 GTDC1Q4AE62 458 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 FAM209AQ5JX71 171 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 TTC23LQ6PF05 361 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 GPSM1Q86YR5 675 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 ZDHHC21Q8IVQ6 265 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 NKAPQ8N5F7 415 aaKnown RBP18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 TTC29Q8NA56 475 aaPredicted RBP18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 TADA1Q96BN2 335 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 SP110Q9HB58 689 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 FBXL12Q9NXK8 326 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 QPCTLQ9NXS2 382 aa18.91■□□□□ 0.62
SNAPC3-206ENST00000490969 ARVCFO00192 962 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 GJB3O75712 270 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 APOA1P02647 267 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 HOXD10P28358 340 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 CLCNKBP51801 687 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 NRG1Q02297 640 aaPredicted RBP18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 MBTPS1Q14703 1052 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 PRSS36Q5K4E3 855 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 ZNF544Q6NX49 715 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 RNF180Q86T96 592 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 TMEM86AQ8N2M4 240 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 PGBD5Q8N414 524 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 PCSK9Q8NBP7 692 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 C3orf58Q8NDZ4 430 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 SCAMP5Q8TAC9 235 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 PRDM8Q9NQV8 689 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 DDX28Q9NUL7 540 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 AGO1Q9UL18 857 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 PCDHGB6Q9Y5F9 930 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 TBKBP1A7MCY6 615 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 ZW10O43264 779 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 MED26O95402 600 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 HOXB6P17509 224 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 EPHA2P29317 976 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 CTSKP43235 329 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 MAGEA2P43356 314 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 OR2B6P58173 313 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 GTF2H3Q13889 308 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 SMUG1Q53HV7 270 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 TSPYL5Q86VY4 417 aaPredicted RBP18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 UMODL1-AS1Q8N2C9 162 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 UBE2FQ969M7 185 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 TRIM62Q9BVG3 475 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 REXO4Q9GZR2 422 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 TM9SF3Q9HD45 589 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 DKK3Q9UBP4 350 aa18.9■□□□□ 0.62
SNAPC3-206ENST00000490969 WASH4PA8MWX3 477 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 FAM220BPB1ANY3 271 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 SSX4O60224 188 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 SERPINF2P08697 491 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 SLC2A4P14672 509 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 RPL38P63173 70 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 GALNT3Q14435 633 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 ABRAXAS2Q15018 415 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 PXYLP1Q8TE99 480 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 FCGR1BQ92637 280 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 PSMG2Q969U7 264 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 CDKN2AIPNLQ96HQ2 116 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 SPO11Q9Y5K1 396 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 ARL5CA6NH57 179 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 M0R082 166 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 WBP4O75554 376 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 TSPAN12O95859 305 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 HOXA9P31269 272 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 HTR3AP46098 478 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 ARHGDIAP52565 204 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 PROX2Q3B8N5 592 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 SPANXN4Q5MJ08 99 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 MSANTD2Q6P1R3 559 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 SNX20Q7Z614 316 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms