RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 SNRNP40Q96DI7 357 aaKnown RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 LINC00615Q96LM1 132 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 TTC25Q96NG3 672 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 APOL2Q9BQE5 337 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 NAT9Q9BTE0 207 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 LRRC1Q9BTT6 524 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 OR52A5Q9H2C5 316 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 ACTR5Q9H9F9 607 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 MRM3Q9HC36 420 aaKnown RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 GPR83Q9NYM4 423 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 ANAPC5Q9UJX4 755 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 ZNF451Q9Y4E5 1061 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 CSAG2Q9Y5P2 127 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 GSAPA4D1B5 854 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 SDR42E2A6NKP2 422 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 BHMG1C9JSJ3 638 aaPredicted RBP8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 E2F3O00716 465 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 DPM1O60762 260 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 SRP72O76094 671 aaKnown RBP8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 MSH3P20585 1137 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 CYP2A7P20853 494 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 CDH3P22223 829 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 MCM3P25205 808 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 PSMA3P25788 255 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 VPS41P49754 854 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 ARL4CP56559 192 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 CUL1Q13616 776 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 SLC9A5Q14940 896 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 ZIC1Q15915 447 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 C2CD3Q4AC94 2353 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 CRB2Q5IJ48 1285 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 PCID2Q5JVF3 399 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 PRUNE1Q86TP1 453 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 IFT20Q8IY31 132 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 PDIK1LQ8N165 341 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 ACVR1CQ8NER5 493 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 OR4E2Q8NGC2 313 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 OR4K2Q8NGD2 314 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 OR52E1Q8NGJ3 308 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 FLVCR1-AS1Q8TAF5 88 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 HM13Q8TCT9 377 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 STYXQ8WUJ0 223 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 CLIP3Q96DZ5 547 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 SGSM3Q96HU1 749 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 TRAPPC9Q96Q05 1148 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 HGH1Q9BTY7 390 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 XKR8Q9H6D3 395 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 COG4Q9H9E3 785 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 ZBTB20Q9HC78 741 aaPredicted RBP8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 FAM60AQ9NP50 221 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 C1GALT1Q9NS00 363 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 ASF1BQ9NVP2 202 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 ICKQ9UPZ9 632 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 PKP3Q9Y446 797 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 PCDHGB7Q9Y5F8 929 aa8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 DNMT3AQ9Y6K1 912 aaPredicted RBP8.16□□□□□ -1.1
PCOLCE-209ENST00000490909 IGLV3-16A0A075B6K0 115 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 H7C0S8 307 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 STX7O15400 261 aaKnown RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 ZNF749O43361 778 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 ALOX12BO75342 701 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 CBX6O95503 412 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 TTC4O95801 387 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 POLBP06746 335 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 TPBGLP0DKB5 382 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 CBSLP0DN79 551 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PAMP19021 973 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 ITGAXP20702 1163 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PDHA2P29803 388 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PRDX3P30048 256 aaKnown RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PEBP1P30086 187 aaKnown RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 OTX2P32243 289 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 CBSP35520 551 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 MAGEA3P43357 314 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 RPL21P46778 160 aaKnown RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PREPP48147 710 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 CDKN1CP49918 316 aaPredicted RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 ITGA8P53708 1063 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 SPARCL1Q14515 664 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PLEKHN1Q494U1 663 aaPredicted RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 TMTC4Q5T4D3 741 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 VWA5B1Q5TIE3 1220 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 MED25Q71SY5 747 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PPP1R32Q7Z5V6 425 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 TICAM1Q8IUC6 712 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 ADGRF3Q8IZF5 1079 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 NXPE1Q8N323 547 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 TMEM102Q8N9M5 508 aaPredicted RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 NOA1Q8NC60 698 aaKnown RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PPHLN1Q8NEY8 458 aaKnown RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 OR52K1Q8NGK4 314 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 GABPB2Q8TAK5 448 aaPredicted RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 PRR7Q8TB68 274 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 ZNF398Q8TD17 642 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 ZFPM2Q8WW38 1151 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 LCN9Q8WX39 176 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 SERPINB12Q96P63 405 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 GBP5Q96PP8 586 aa8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 BARD1Q99728 777 aaKnown RBP8.15□□□□□ -1.1
PCOLCE-209ENST00000490909 TRIM51Q9BSJ1 452 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms