RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 DYNC1I2Q13409 638 aaKnown RBP9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 BOP1Q14137 746 aaKnown RBP9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 KIAA0040Q15053 153 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MAPKAPK3Q16644 382 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 KCTD21Q4G0X4 260 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SGO1Q5FBB7 561 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PLPP4Q5VZY2 271 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CWF19L1Q69YN2 538 aaKnown RBP9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MBOAT1Q6ZNC8 495 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FKBP9P1Q75LS8 142 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SATL1Q86VE3 508 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TMEM25Q86YD3 366 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 EPHX4Q8IUS5 362 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CHST14Q8NCH0 376 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TSPAN14Q8NG11 270 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SKA2Q8WVK7 121 aaPredicted RBP9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 POP5Q969H6 163 aaKnown RBP9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 BIRC7Q96CA5 298 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TCF25Q9BQ70 676 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HEPHQ9BQS7 1158 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SLC12A9Q9BXP2 914 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TRIM8Q9BZR9 551 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GRIP2Q9C0E4 1043 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ELOVL6Q9H5J4 265 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PIDD1Q9HB75 910 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PARVBQ9HBI1 364 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SPHK2Q9NRA0 654 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DNAJC11Q9NVH1 559 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HCFC1R1Q9NWW0 138 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SNX6Q9UNH7 406 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ERVW-1Q9UQF0 538 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DMTF1Q9Y222 760 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PDE10AQ9Y233 779 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 KCNE1BA0A087WTH5 132 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RNF103-CHMP3A0A140T963 221 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TRIM43BA6NCK2 446 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 H3BNH8 94 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SLC9A3R1O14745 358 aaPredicted RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 XYLBO75191 536 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DEAF1O75398 565 aaPredicted RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ERN1O75460 977 aaKnown RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 H6PDO95479 791 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ASLP04424 464 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TFAP2AP05549 437 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ATP1B2P14415 290 aaPredicted RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TYRP14679 529 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ATP6V1B1P15313 513 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TCF3P15923 654 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GGT1P19440 569 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 XPAP23025 273 aaPredicted RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MYF6P23409 242 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PRPH2P23942 346 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CCR7P32248 378 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CTNNB1P35222 781 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 NNMTP40261 264 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CCR2P41597 374 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MAPK9P45984 424 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MTPNP58546 118 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RPS14P62263 151 aaKnown RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TUBA4AP68366 448 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HMGCS1Q01581 520 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ZNF33BQ06732 778 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CYP4F3Q08477 520 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HSPA14Q0VDF9 509 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 POU4F2Q12837 409 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SELPLGQ14242 412 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GK3PQ14409 553 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PTGR1Q14914 329 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ZNF77Q15935 545 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ZNF284Q2VY69 593 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FAM174BQ3ZCQ3 159 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 NADK2Q4G0N4 442 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SYTL3Q4VX76 610 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RFTN2Q52LD8 501 aaPredicted RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FAM98BQ52LJ0 330 aaKnown RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GLYATQ6IB77 296 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 BORAQ6PGQ7 559 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RBM44Q6ZP01 1051 aaKnown RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RFLNAQ6ZTI6 216 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MSANTD1Q6ZTZ1 278 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DPPA4Q7L190 304 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DET1Q7L5Y6 550 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RGL4Q8IZJ4 473 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TRAM1L1Q8N609 369 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 BEND7Q8N7W2 519 aaPredicted RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 OR2T12Q8NG77 320 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ITFG1Q8TB96 612 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FAM110BQ8TC76 370 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 BPIFB1Q8TDL5 484 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 WFIKKN2Q8TEU8 576 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SELENOMQ8WWX9 145 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TFAP2CQ92754 450 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CLP1Q92989 425 aaKnown RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 VOPP1Q96AW1 172 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TRIM43Q96BQ3 446 aaPredicted RBP9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FBXL8Q96CD0 374 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 OTUB2Q96DC9 234 aa9.32□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TCEAL4Q96EI5 215 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms