RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 ELFN2Q5R3F8 820 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 SFMBT2Q5VUG0 894 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 PRR27Q6MZM9 219 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 ERN2Q76MJ5 926 aaKnown RBP3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 NUP54Q7Z3B4 507 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 SMIM29Q86T20 159 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 VSIG1Q86XK7 387 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 TICAM2Q86XR7 235 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 TMEM139Q8IV31 216 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 MAML2Q8IZL2 1156 aaPredicted RBP3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 CDK20Q8IZL9 346 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 STPG4Q8N801 248 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 ZNF611Q8N823 705 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 IQUBQ8NA54 791 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 NPEPL1Q8NDH3 523 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 KLHDC9Q8NEP7 349 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 HSD17B8Q92506 261 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 TMEM143Q96AN5 459 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 SPSB1Q96BD6 273 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 MOB3AQ96BX8 217 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 FER1L6-AS2Q96M78 137 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 GBP5Q96PP8 586 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 FAM129AQ9BZQ8 928 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 MIS12Q9H081 205 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 Q9N2K0 584 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 A4GALTQ9NPC4 353 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 GKN1Q9NS71 199 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 LRWD1Q9UFC0 647 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 DAPK2Q9UIK4 370 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 ACAD8Q9UKU7 415 aa3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 TEP1Q99973 2627 aaKnown RBP3.25□□□□□ -1.89
AC055855.1-201ENST00000489563 LRRC7Q96NW7 1537 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 CAMTA1Q9Y6Y1 1673 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 ANKRD61A6NGH8 418 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 KRTAP29-1A8MX34 341 aaPredicted RBP3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 DNM1LO00429 736 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 CLDN4O14493 209 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 PTGESO14684 152 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 PRKRAO75569 313 aaKnown RBP3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 ACSL3O95573 720 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 HSPA4LO95757 839 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 IGHV4-38-2P0DP08 117 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 LIFP15018 202 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 CYP11B2P19099 503 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 PTAFRP25105 342 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 DCTP40126 519 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 LHX1P48742 406 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 LINC01547P58512 204 aaPredicted RBP3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 PPIGQ13427 754 aaKnown RBP eCLIP3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 TAF13Q15543 124 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 HYAL4Q2M3T9 481 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 MCMDC2Q4G0Z9 681 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 SPECC1Q5M775 1068 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 ARMC3Q5W041 872 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 SLC35E4Q6ICL7 350 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 CEACAM20Q6UY09 585 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 RBMS3Q6XE24 437 aaKnown RBP3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 PPP1R21Q6ZMI0 780 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 FAM47EQ6ZV65 393 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 TRPT1Q86TN4 253 aaKnown RBP3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 TLK2Q86UE8 772 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 NUDT13Q86X67 352 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 DCUN1D3Q8IWE4 304 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 THAP8Q8NA92 274 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 GRHL3Q8TE85 626 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 EXT2Q93063 718 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 OTUB1Q96FW1 271 aaPredicted RBP3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 SPATA17Q96L03 361 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 CPNE1Q99829 537 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 EGFL8Q99944 293 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 URM1Q9BTM9 101 aaKnown RBP3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 CACNG4Q9UBN1 327 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 ZDHHC2Q9UIJ5 367 aa3.24□□□□□ -1.89
AC055855.1-201ENST00000489563 COL6A3P12111 3177 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 CCDC180Q9P1Z9 1646 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 IGLV9-49A0A0B4J1Y8 123 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 A0A0G2JLW4 131 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 ARHGEF37A1IGU5 675 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 TSHBP01222 138 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 SAGP10523 405 aaPredicted RBP3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 CD22P20273 847 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 MAT1AQ00266 395 aaKnown RBP3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 ZNF415Q09FC8 603 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 TFCP2Q12800 502 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 CUL3Q13618 768 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 VEZF1Q14119 521 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 ZNF273Q14593 569 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 CA9Q16790 459 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 ODF4Q2M2E3 257 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 ITPRIPL2Q3MIP1 535 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 ZC2HC1CQ53FD0 456 aaPredicted RBP3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 TCTE1Q5JU00 501 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 IL27RAQ6UWB1 636 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 ISCA2Q86U28 154 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 THNSL1Q8IYQ7 743 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 CCAR2Q8N163 923 aaKnown RBP3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 ZNF383Q8NA42 475 aa3.23□□□□□ -1.89
AC055855.1-201ENST00000489563 OR11H4Q8NGC9 324 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms