RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ZNF225Q9UK10 706 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 MAPRE3Q9UPY8 281 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 TMED5Q9Y3A6 229 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 ANGPTL3Q9Y5C1 460 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 PLXNA2O75051 1894 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 KMT2EQ8IZD2 1858 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 KRBA1A5PL33 1030 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 TMEM221A6NGB7 291 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 LRRC14BA6NHZ5 514 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 NEDD8-MDP1E9PL57 170 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 GFYI3L273 518 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 M0R296 226 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 FXYD1O00168 92 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 PPP6CO00743 305 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 OR7A17O14581 309 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 LSM1O15116 133 aaKnown RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 KIF1CO43896 1103 aaKnown RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 SYNCRIPO60506 623 aaKnown RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 STK16O75716 305 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 TRIM16O95361 564 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 IL6P05231 212 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CAPN1P07384 714 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 THBS1P07996 1170 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 HIST1H2AGP0C0S8 130 aaPredicted RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ATP1B2P14415 290 aaPredicted RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 GLULP15104 373 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 TSPAN8P19075 237 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 HIST1H2ADP20671 130 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CAPN3P20807 821 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CYP2A7P20853 494 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 SLC6A2P23975 617 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 PEX2P28328 305 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 MAPK1P28482 360 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 HTR1EP28566 365 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 AGTR2P50052 363 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 SLC7A2P52569 658 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 STARD6P59095 220 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 MRPS22P82650 360 aaKnown RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CREB5Q02930 508 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 GRM2Q14416 872 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 GRB7Q14451 532 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 GRAMD1BQ3KR37 738 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ZNF805Q5CZA5 627 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 C6orf10Q5SRN2 563 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 LDLRAP1Q5SW96 308 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CAPRIN2Q6IMN6 1127 aaKnown RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 LETMD1Q6P1Q0 360 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 MSANTD1Q6ZTZ1 278 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ZNF765Q7L2R6 523 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ZSWIM9Q86XI8 627 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 PROSER1Q86XN7 944 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 TMEM25Q86YD3 366 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 HID1Q8IV36 788 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 RASGRP3Q8IV61 690 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 SLC15A3Q8IY34 581 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 KLHDC8AQ8IYD2 350 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ADGRG2Q8IZP9 1017 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CDYL2Q8N8U2 506 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 PNPLA1Q8N8W4 532 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 FNDC5Q8NAU1 212 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 OR4F6Q8NGB9 312 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 OR8J3Q8NGG0 315 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 OR6K2Q8NGY2 324 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 FRS2Q8WU20 508 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ASZ1Q8WWH4 475 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ATL1Q8WXF7 558 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 DNASE1L2Q92874 299 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 USP7Q93009 1102 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ATP6V1E2Q96A05 226 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 MIEF2Q96C03 454 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CHFRQ96EP1 664 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 DCUN1D1Q96GG9 259 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 HIST1H2AHQ96KK5 128 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 TRAPPC9Q96Q05 1148 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 KCNA7Q96RP8 456 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ZBTB18Q99592 522 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 HIST1H2AJQ99878 128 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 EGFL8Q99944 293 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 H2AFJQ9BTM1 129 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 TRMT61BQ9BVS5 477 aaKnown RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 OSBPL6Q9BZF3 934 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 SMG9Q9H0W8 520 aaKnown RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 HPS4Q9NQG7 708 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CCM2LQ9NUG4 571 aaPredicted RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 PLK2Q9NYY3 685 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 NDUFA13Q9P0J0 144 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 CLEC4EQ9ULY5 219 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 SNX6Q9UNH7 406 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 ERVW-1Q9UQF0 538 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 EIF3LQ9Y262 564 aaKnown RBP8.26□□□□□ -1.09
VTI1A-207ENST00000489357 PCDHA9Q9Y5H5 950 aa8.26□□□□□ -1.09
VTI1A-207ENST00000489357 PLXNB3Q9ULL4 1909 aa8.25□□□□□ -1.09
VTI1A-207ENST00000489357 COL4A3Q01955 1670 aa8.25□□□□□ -1.09
VTI1A-207ENST00000489357 OTOL1A6NHN0 477 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-207ENST00000489357 NCF1BA6NI72 391 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-207ENST00000489357 IQCF5A8MTL0 148 aa8.25□□□□□ -1.09
VTI1A-207ENST00000489357 NCF1CA8MVU1 366 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-207ENST00000489357 NME4O00746 187 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms