RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ANAPC5Q9UJX4 755 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 ACAD8Q9UKU7 415 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 TMED3Q9Y3Q3 217 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 NME7Q9Y5B8 376 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 LIPGQ9Y5X9 500 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 IGLV9-49A0A0B4J1Y8 123 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 FAM172BPA6NC97 362 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 SLC22A2O15244 555 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 AP5Z1O43299 807 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 RECQL5O94762 991 aaPredicted RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 PIGNO95427 931 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 NGFP01138 241 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 PRSS1P07477 247 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 QDPRP09417 244 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 FRMD6-AS1P0C7T7 363 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 GLULP15104 373 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 PAX1P15863 534 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 SLC6A6P31641 620 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 MNDAP41218 407 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 NR2C2P49116 596 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 NPY4RP50391 375 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 PDX1P52945 283 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 LIMK1P53667 647 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 UBASH3AP57075 661 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 PHEXP78562 749 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 MZT1Q08AG7 82 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 ITGA7Q13683 1181 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 ZNF273Q14593 569 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 CA9Q16790 459 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 UGP2Q16851 508 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 MCMDC2Q4G0Z9 681 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 ZC2HC1CQ53FD0 456 aaPredicted RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 FAM133BQ5BKY9 247 aaKnown RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 XKR3Q5GH77 459 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 TCTE1Q5JU00 501 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 ELFN2Q5R3F8 820 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 CCNYL2Q5T2Q4 361 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 PRR27Q6MZM9 219 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 C11orf63Q6NUN7 778 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 RBMS3Q6XE24 437 aaKnown RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 ADCK2Q7Z695 626 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 DNAJB7Q7Z6W7 309 aaPredicted RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 TRPT1Q86TN4 253 aaKnown RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 RTN4RL2Q86UN3 420 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 FAM219AQ8IW50 185 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 CDK20Q8IZL9 346 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 CCAR2Q8N163 923 aaKnown RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 ZNF383Q8NA42 475 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 ROBO4Q8WZ75 1007 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 EXT2Q93063 718 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 MOB3AQ96BX8 217 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 SENP5Q96HI0 755 aaPredicted RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 MUS81Q96NY9 551 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 RAD9AQ99638 391 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 SLC25A23Q9BV35 468 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 SLC2A11Q9BYW1 496 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 FZD8Q9H461 694 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 SDR39U1Q9NRG7 319 aaPredicted RBP2.97□□□□□ -1.93
CD46-215ENST00000488596 MRGBPQ9NV56 204 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 COQ3Q9NZJ6 369 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 CACNG4Q9UBN1 327 aa2.97□□□□□ -1.93
CD46-215ENST00000488596 A0A1W2PPK0 400 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 ANKRD61A6NGH8 418 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 SMIM1B2RUZ4 78 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CLDN4O14493 209 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 TBCAO75347 108 aaKnown RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 SERPINB2P05120 415 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CD48P09326 243 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 IGHV4-38-2P0DP08 117 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 HAPLN1P10915 354 aaPredicted RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 LIFP15018 202 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 TCF4P15884 667 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 PDGFRAP16234 1089 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 IFNAR1P17181 557 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CA4P22748 312 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CEACAM8P31997 349 aaPredicted RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 PTGER4P35408 488 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 TIMP3P35625 211 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 PRKCIP41743 596 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 NKX2-1P43699 371 aaPredicted RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 CRKLP46109 303 aaKnown RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 GLIPR1P48060 266 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 LHX1P48742 406 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 TAF6P49848 677 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 ASCL1P50553 236 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CRIP2P52943 208 aaPredicted RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 IRX6P78412 446 aaPredicted RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 PRKCZQ05513 592 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 TFCP2Q12800 502 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 UGT3A2Q3SY77 523 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CYP4A22Q5TCH4 519 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 SFMBT2Q5VUG0 894 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 ADAM5Q6NVV9 412 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CAVIN1Q6NZI2 390 aaKnown RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 TRAT1Q6PIZ9 186 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 ERN2Q76MJ5 926 aaKnown RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 TLK2Q86UE8 772 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 ZNF611Q8N823 705 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 BMPERQ8N8U9 685 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 IQUBQ8NA54 791 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms