RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 TNRC6BQ9UPQ9 1833 aaKnown RBP12.39□□□□□ -0.43
NELFE-209ENST00000488426 A0A1B0GTL3 188 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 SLC30A4O14863 429 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 EPB42P16452 691 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 MAOBP27338 520 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 PRDX3P30048 256 aaKnown RBP12.38□□□□□ -0.43
NELFE-209ENST00000488426 MNAT1P51948 309 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 CCNG1P51959 295 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 RPL6Q02878 288 aaKnown RBP12.38□□□□□ -0.43
NELFE-209ENST00000488426 TRAF3Q13114 568 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 CRTC3Q6UUV7 619 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 MBOAT1Q6ZNC8 495 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 ERMP1Q7Z2K6 904 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 C11orf96Q7Z7L8 435 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 TRIM69Q86WT6 500 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 CFAP206Q8IYR0 622 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 DENND6BQ8NEG7 585 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 OR52B6Q8NGF0 335 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 NETO1Q8TDF5 533 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 ATL1Q8WXF7 558 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 CMTM5Q96DZ9 223 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 KCNA7Q96RP8 456 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 LGR4Q9BXB1 951 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 RMI1Q9H9A7 625 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 KLC4Q9NSK0 619 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 TMEM98Q9Y2Y6 226 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 ST14Q9Y5Y6 855 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 ADAMTS9Q9P2N4 1935 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 ARHGEF33A8MVX0 844 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 H0YHG0 523 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 PIP5K1BO14986 540 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 KMOO15229 486 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 OR4F21O95013 312 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 NQO1P15559 274 aaKnown RBP12.38□□□□□ -0.43
NELFE-209ENST00000488426 IGFALSP35858 605 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 SLC6A12P48065 614 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 ERVPABLB-1P60509 514 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 IRX1P78414 480 aaPredicted RBP12.38□□□□□ -0.43
NELFE-209ENST00000488426 ABRQ12979 859 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 KLF10Q13118 480 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 STPG1Q5TH74 334 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 LETMD1Q6P1Q0 360 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 DOK6Q6PKX4 331 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 LARP4Q71RC2 724 aaKnown RBP eCLIP12.38□□□□□ -0.43
NELFE-209ENST00000488426 LPCAT2Q7L5N7 544 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 AMZ2Q86W34 360 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 LILRA3Q8N6C8 439 aaPredicted RBP12.38□□□□□ -0.43
NELFE-209ENST00000488426 KLK6Q92876 244 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 FOXJ1Q92949 421 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 ATP6V1E2Q96A05 226 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 CCDC138Q96M89 665 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 RAB3IPQ96QF0 476 aaPredicted RBP12.38□□□□□ -0.43
NELFE-209ENST00000488426 NTMT1Q9BV86 223 aa12.38□□□□□ -0.43
NELFE-209ENST00000488426 DOCK9Q9BZ29 2069 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 LRRC72A6NJI9 287 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 CDX4O14627 284 aaPredicted RBP12.37□□□□□ -0.43
NELFE-209ENST00000488426 HOXC4P09017 264 aaPredicted RBP12.37□□□□□ -0.43
NELFE-209ENST00000488426 EBLN1P0CF75 366 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 PDHA2P29803 388 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 GDF5P43026 501 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 ATP4BP51164 291 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 TPMTP51580 245 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 NAA25Q14CX7 972 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.37□□□□□ -0.43
NELFE-209ENST00000488426 XKR5Q6UX68 686 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 RNF165Q6ZSG1 346 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 MILR1Q7Z6M3 343 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 DDIASQ8IXT1 998 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 KLHDC8AQ8IYD2 350 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 OR4F6Q8NGB9 312 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 OR2T34Q8NGX1 318 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 CFAP61Q8NHU2 1237 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 SPACA7Q96KW9 195 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 CATSPER2Q96P56 530 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 BTBD10Q9BSF8 475 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 RTKNQ9BST9 563 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 BTBD1Q9H0C5 482 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 TUBB1Q9H4B7 451 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 SGK2Q9HBY8 427 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 ITM2CQ9NQX7 267 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.37□□□□□ -0.43
NELFE-209ENST00000488426 USP36Q9P275 1121 aaKnown RBP12.37□□□□□ -0.43
NELFE-209ENST00000488426 TRPS1Q9UHF7 1281 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 PILRBQ9UKJ0 227 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 OR1A2Q9Y585 309 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 SLCO1B1Q9Y6L6 691 aa12.37□□□□□ -0.43
NELFE-209ENST00000488426 C4orf47A7E2U8 309 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 UBDO15205 165 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 C1orf105O95561 183 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 IGLV3-19P01714 112 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 HGFP14210 728 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 ARL1P40616 181 aaPredicted RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 PPP2CBP62714 309 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 PPP2CAP67775 309 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 NFE2L1Q14494 772 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 SQLEQ14534 574 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 HERC3Q15034 1050 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 PTCHD3Q3KNS1 767 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 XKR7Q5GH72 579 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 TMEM198Q66K66 360 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms