RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 MIB2Q96AX9 1013 aa18.6■□□□□ 0.57
CD55-209ENST00000488171 DHRS4Q9BTZ2 278 aa18.6■□□□□ 0.57
CD55-209ENST00000488171 HOMER3Q9NSC5 361 aa18.6■□□□□ 0.57
CD55-209ENST00000488171 DHCR7Q9UBM7 475 aaKnown RBP18.6■□□□□ 0.57
CD55-209ENST00000488171 SOX13Q9UN79 622 aa18.6■□□□□ 0.57
CD55-209ENST00000488171 PPP2R2CQ9Y2T4 447 aa18.6■□□□□ 0.57
CD55-209ENST00000488171 MED13Q9UHV7 2174 aa18.6■□□□□ 0.57
CD55-209ENST00000488171 VAPBO95292 243 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 MLLT10P55197 1068 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 EIF3BP55884 814 aaKnown RBP18.59■□□□□ 0.57
CD55-209ENST00000488171 KCNJ11Q14654 390 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 TYSND1Q2T9J0 566 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 PROKR1Q8TCW9 393 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 SLC22A18Q96BI1 424 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 BIRC8Q96P09 236 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 EURLQ9NYK6 297 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 SRPK3Q9UPE1 567 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 PADI2Q9Y2J8 665 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 NFS1Q9Y697 457 aa18.59■□□□□ 0.57
CD55-209ENST00000488171 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.58■□□□□ 0.57
CD55-209ENST00000488171 GOLGA8KD6RF30 607 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 GOLGA8TH3BQL2 631 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 PRICKLE3O43900 615 aaPredicted RBP18.58■□□□□ 0.57
CD55-209ENST00000488171 AVILO75366 819 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 S1PR4O95977 384 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 MAGEA6P43360 314 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 GCGRP47871 477 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 TERF1P54274 439 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 DCDP81605 110 aaKnown RBP18.58■□□□□ 0.57
CD55-209ENST00000488171 ATP1A4Q13733 1029 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 CCSMST1Q4G0I0 132 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 MLIPQ5VWP3 458 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 FCRL6Q6DN72 434 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 TTC27Q6P3X3 843 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 OTOAQ7RTW8 1153 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 OTUD6BQ8N6M0 293 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 FDCSPQ8NFU4 85 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 LPGAT1Q92604 370 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 C17orf62Q9BQA9 187 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 SLC39A10Q9ULF5 831 aa18.58■□□□□ 0.57
CD55-209ENST00000488171 RUVBL2Q9Y230 463 aaKnown RBP18.58■□□□□ 0.57
CD55-209ENST00000488171 RELNP78509 3460 aa18.58■□□□□ 0.56
CD55-209ENST00000488171 KRT87PA6NCN2 255 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 KPNA5O15131 536 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 CNOT3O75175 753 aaKnown RBP18.57■□□□□ 0.56
CD55-209ENST00000488171 C1orf105O95561 183 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 FMO4P31512 558 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 BDKRB1P46663 353 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 CD97P48960 835 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 VPS41P49754 854 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 NADK2Q4G0N4 442 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 ANKRD22Q5VYY1 191 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 MRNIPQ6NTE8 343 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 MED25Q71SY5 747 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 RAB43Q86YS6 212 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 MCATQ8IVS2 390 aaKnown RBP18.57■□□□□ 0.56
CD55-209ENST00000488171 TMEM151BQ8IW70 566 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 TMEM102Q8N9M5 508 aaPredicted RBP18.57■□□□□ 0.56
CD55-209ENST00000488171 GSDMBQ8TAX9 411 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 RAD51AP1Q96B01 352 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 RAB11FIP5Q9BXF6 653 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 TXLNGQ9NUQ3 528 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 IRAK4Q9NWZ3 460 aa18.57■□□□□ 0.56
CD55-209ENST00000488171 IFT80Q9P2H3 777 aaPredicted RBP18.57■□□□□ 0.56
CD55-209ENST00000488171 ZNF185O15231 689 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 NIPSNAP2O75323 286 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 OTX2P32243 289 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 FOXL2P58012 376 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 GPS1Q13098 491 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 GBX1Q14549 363 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 SSPNQ14714 243 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 SLC9A5Q14940 896 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 SF1Q15637 639 aaKnown RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 NKAIN1Q4KMZ8 207 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 KIAA0930Q6ICG6 404 aaPredicted RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 MRPL14Q6P1L8 145 aaKnown RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 FIGLAQ6QHK4 219 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 MRGPREQ86SM8 312 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 SDCCAG8Q86SQ7 713 aaPredicted RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 CAND1Q86VP6 1230 aaKnown RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 RASGEF1CQ8N431 466 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 DENND1AQ8TEH3 1009 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 TCF12Q99081 682 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 TRIM56Q9BRZ2 755 aaKnown RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 NDC1Q9BTX1 674 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 NUDT9Q9BW91 350 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 SLC22A11Q9NSA0 550 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 GPN3Q9UHW5 284 aaPredicted RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 PTRH2Q9Y3E5 179 aaKnown RBP18.56■□□□□ 0.56
CD55-209ENST00000488171 SEC16AO15027 2179 aa18.56■□□□□ 0.56
CD55-209ENST00000488171 CLEC18AA5D8T8 446 aa18.55■□□□□ 0.56
CD55-209ENST00000488171 KRT14P02533 472 aa18.55■□□□□ 0.56
CD55-209ENST00000488171 ITGAXP20702 1163 aa18.55■□□□□ 0.56
CD55-209ENST00000488171 GRIA3P42263 894 aa18.55■□□□□ 0.56
CD55-209ENST00000488171 RRADP55042 308 aa18.55■□□□□ 0.56
CD55-209ENST00000488171 ADARP55265 1226 aaKnown RBP18.55■□□□□ 0.56
CD55-209ENST00000488171 RNF187Q5TA31 235 aaPredicted RBP18.55■□□□□ 0.56
CD55-209ENST00000488171 TTC23LQ6PF05 361 aa18.55■□□□□ 0.56
CD55-209ENST00000488171 CNSTQ6PJW8 725 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms