RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SLC25A3Q00325 362 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 ZP2Q05996 745 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 NAE1Q13564 534 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 GSTA3Q16772 222 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 FBXW10Q5XX13 1052 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 CAPRIN2Q6IMN6 1127 aaKnown RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 GK5Q6ZS86 529 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 DCUN1D3Q8IWE4 304 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 FAM13CQ8NE31 585 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 MAGEB10Q96LZ2 347 aaPredicted RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 HBEGFQ99075 208 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 SGPP1Q9BX95 441 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 LMAN1LQ9HAT1 526 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 LTB4R2Q9NPC1 389 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 FARSBQ9NSD9 589 aaKnown RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 KLQ9UEF7 1012 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 ACSL5Q9ULC5 683 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 SUFUQ9UMX1 484 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 GPR45Q9Y5Y3 372 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 A8MUI8 341 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 H0Y8X5 98 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 FPGTO14772 594 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 KCNJ13O60928 360 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 ULK1O75385 1050 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 IGHV4-34P06331 123 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 ERGP11308 486 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 JUPP14923 745 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CD22P20273 847 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 ITGAXP20702 1163 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 DIO3P55073 304 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CLDN2P57739 230 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 STX1BP61266 288 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 TBPL1P62380 186 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MXRA7P84157 204 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 GRIK2Q13002 908 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CHIT1Q13231 466 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CUL3Q13618 768 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 NFATC4Q14934 902 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MAPRE2Q15555 327 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 ATP6AP1LQ52LC2 224 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 TPRG1LQ5T0D9 272 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 GCNT7Q6ZNI0 430 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CHST15Q7LFX5 561 aaPredicted RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 GALNT13Q8IUC8 556 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 FUNDC1Q8IVP5 155 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MIER2Q8N344 545 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 TMEM145Q8NBT3 493 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 PPFIBP2Q8ND30 876 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 OR5AR1Q8NGP9 310 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 OR9I1Q8NGQ6 314 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 OR5K2Q8NHB8 316 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MAGEC3Q8TD91 643 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 TFGQ92734 400 aaPredicted RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MCUR1Q96AQ8 359 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 RCN3Q96D15 328 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 BMFQ96LC9 184 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 EBF2Q9HAK2 575 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MRPL40Q9NQ50 206 aaKnown RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 PSMD13Q9UNM6 376 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 ASF1AQ9Y294 204 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CA5BQ9Y2D0 317 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MRPS17Q9Y2R5 130 aaKnown RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 KANSL1LA0AUZ9 987 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 PRSS38A1L453 326 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 SERTM1A2A2V5 107 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 E7ENX8 843 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 E7EQ34 232 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 NPIPB8E9PQR5 432 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 KRT6AP02538 564 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 KRT6BP04259 564 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 SLC35G4P0C7Q5 338 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 EZRP15311 586 aaKnown RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 PGM1P36871 562 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CASP2P42575 452 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 ZFP36L2P47974 494 aaKnown RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 KRT6CP48668 564 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CCR5P51681 352 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 RAP1GDS1P52306 607 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 TAP2Q03519 686 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 EMX2Q04743 252 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 RIPK1Q13546 671 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CPSF6Q16630 551 aaKnown RBP eCLIP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 SMU1Q2TAY7 513 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 AGKQ53H12 422 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 LIPJQ5W064 366 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 ANO7Q6IWH7 933 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 PAOXQ6QHF9 649 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MYLK4Q86YV6 388 aaPredicted RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 RAD51AP1Q96B01 352 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MED8Q96G25 268 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 MENTQ9BUN1 341 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 C6orf106Q9H6K1 298 aaPredicted RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 PRDM6Q9NQX0 595 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 GPRC5BQ9NZH0 403 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 CCDC167Q9P0B6 97 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 ZNF490Q9ULM2 529 aaPredicted RBP9.16□□□□□ -0.94
SF3B1-211ENST00000487698 WDR37Q9Y2I8 494 aa9.16□□□□□ -0.94
SF3B1-211ENST00000487698 EML5Q05BV3 1969 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 HEATR5BQ9P2D3 2071 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 A0A088AWK7 358 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms